Structure of PDB 2r5z Chain B Binding Site BS01
Receptor Information
>2r5z Chain B (length=59) Species:
7227
(Drosophila melanogaster) [
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RRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGN
KRIRYKKNI
Ligand information
>2r5z Chain C (length=20) [
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actctaagattaatcggctg
Receptor-Ligand Complex Structure
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PDB
2r5z
Functional specificity of a Hox protein mediated by the recognition of minor groove structure
Resolution
2.6 Å
Binding residue
(original residue number in PDB)
F208 Q244 N247 W248 N251 R255
Binding residue
(residue number reindexed from 1)
F4 Q43 N46 W47 N50 R54
Binding affinity
PDBbind-CN
: Kd=8.63nM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000981
DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677
DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
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Molecular Function
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Biological Process
External links
PDB
RCSB:2r5z
,
PDBe:2r5z
,
PDBj:2r5z
PDBsum
2r5z
PubMed
17981120
UniProt
P40427
|EXD_DROME Homeobox protein extradenticle (Gene Name=exd)
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