Structure of PDB 2ql2 Chain B Binding Site BS01
Receptor Information
>2ql2 Chain B (length=59) Species:
10090
(Mus musculus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SRRMKANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYI
WALSEILRS
Ligand information
>2ql2 Chain E (length=16) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
taggccatctggtcct
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2ql2
Crystal structure of E47-NeuroD1/beta2 bHLH domain-DNA complex: heterodimer selectivity and DNA recognition.
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
N107 R111 S138 K139
Binding residue
(residue number reindexed from 1)
N7 R11 S38 K39
Binding affinity
PDBbind-CN
: Kd=3.5nM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0046983
protein dimerization activity
View graph for
Molecular Function
External links
PDB
RCSB:2ql2
,
PDBe:2ql2
,
PDBj:2ql2
PDBsum
2ql2
PubMed
18069799
UniProt
Q60867
|NDF1_MOUSE Neurogenic differentiation factor 1 (Gene Name=Neurod1)
[
Back to BioLiP
]