Structure of PDB 2gtt Chain B Binding Site BS01

Receptor Information
>2gtt Chain B (length=401) Species: 11292 (Lyssavirus rabies) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KIVFKVNNQVVSLKPEIIVDQHEYKYPAIKDLKKPCITLGKAPDLNKAYK
SVLSGMSAAKLDPDDVCSYLAAAMQFFEGTCPEDWTSYGIVIARKGDKIG
NWALTGGMELTRDPTVPEHASLVGLLLSLYRLSKISGQNTGNYKTNIADR
IEQIFETAPFVKIVEHHTTHKMCANWSTIPNFRFLAGTYDMFFSRIEHLY
SAIRVGTVVTAYEDCSGLVSFTGFIKQINLTAREAILYFFHKNFEEEIRR
MFEPGQETAVPHSYFIHFRSLGLSGKSPYSSNAVGHVFNLIHFVGCYMGQ
VRSLNATVIAACAPHEMSVLGGYLGEEFFGKGTFERRFFRDEKELQEYEA
ETRSPEAVYTRIMMNGGRLKRSHIRRYVSVSSNHQARPNSFAEFLNKTYS
S
Ligand information
>2gtt Chain W (length=99) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
cccccccacccacaaaaaccacaacacccacaaacccaaaaaaccccaca
acccccccacaccccaccaaccccacaaaccccacacaccccacaaaac
..................................................
.................................................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB2gtt Crystal Structure of the Rabies Virus Nucleoprotein-RNA Complex
Resolution3.49 Å
Binding residue
(original residue number in PDB)		R149 N157 Y161 R168 R204 A223 V226 V230 D235 C236 S237 S301 S302 R323 T328 R434
Binding residue
(residue number reindexed from 1)		R131 N139 Y143 R150 R183 A202 V205 V209 D214 C215 S216 S280 S281 R302 T307 R387
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0019013 viral nucleocapsid
GO:0019029 helical viral capsid
GO:0030430 host cell cytoplasm
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:2gtt, PDBe:2gtt, PDBj:2gtt
PDBsum2gtt
PubMed16778023
UniProtP0DOF3|NCAP_RABVE Nucleoprotein (Gene Name=N)

[Back to BioLiP]