Structure of PDB 2duo Chain B Binding Site BS01

Receptor Information
>2duo Chain B (length=243) Species: 9615 (Canis lupus familiaris) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SEHLKREHSLIKPYQGVGSSSMPLWDFQGSTILTSQYVRLTPDERSKEGS
IWNHQPCFLKDWEMHVHFKVHGTGKKNLHGDGIALWYTRDRLVPGPVFGS
KDNFHGLAIFLDTYPNDETTERVFPYISVMVNNGSLSYDHSKDGRWTELA
GCTADFRNRDHDTFLAVRYSRGRLTVMTDLEDKNEWKNCIDITGVRLPTG
YYFGASAGTGDLSDNHDIISMKLFQLMVEHIDWTKIEPSVNFL
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain2duo Chain B Residue 2 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB2duo Structural basis for recognition of high mannose type glycoproteins by mammalian transport lectin VIP36
Resolution1.8 Å
Binding residue
(original residue number in PDB)		D162 Y164 N166 D193
Binding residue
(residue number reindexed from 1)		D112 Y114 N116 D143
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:2duo, PDBe:2duo, PDBj:2duo
PDBsum2duo
PubMed17652092
UniProtP49256|LMAN2_CANLF Vesicular integral-membrane protein VIP36 (Gene Name=LMAN2)

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