Structure of PDB 2d5w Chain B Binding Site BS01

Receptor Information
>2d5w Chain B (length=602) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MGPQDNSLVIGASQEPRVLAGDFLRVISNQAIKSEIEQYLFAPFIGFNAD
SQNFPVLATEVPTLENGRLRVTDIGGGKKRLEMDITIRPDAKWSDGRPIT
TEDVAFYFEVGKAKGMPVLNPDFWERVNVRIKDARNFTLIFEPAYYYDTY
GPINTYAPKHIMGPEWERVKAAARGLDPDKDAEKLNELYRNFFLKFATPQ
ALNRGAMVYSGPFKLKRWVPGNSIEMERNPNFPIKPEGGESKYVQKVVYR
FIQNTNSLLVAVIGGSIDATSSVSLTFDQGRSPQLVRRAPGRFDIWFVPG
AIWEHIDINKFENCQVVKDLGLNDKRTRQAILHALNREGLVKAFFDGLQP
VAHTWIAPVNPLFNPNVKKYEFDLKKAEALLAEMGWRKGPDGILQRTVNG
RTVRFEIEYVTTAGNVVRERTQQFFAEDLKKIGIAVKINNAPSAVVFADE
FIQRASECKWTGMFEFAWVSNLQEDGSLFQYKNLNTGAIMVPTKENNYQG
QNIGGWRNDEFDRLTSQAVLEFDPERRKQLFWRAQEIWAEELPALPLYFR
ANPYVVRKGLVNYVASAYSGGYGYPGWNAWEIGWESRGAVKKWDQAKYAL
ST
Ligand information
Receptor-Ligand Complex Structure
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PDB2d5w The crystal structure of oligopeptide binding protein from Thermus thermophilus HB8 complexed with pentapeptide
Resolution1.3 Å
Binding residue
(original residue number in PDB)		Q14 N29 Q30 A31 S34 S272 R418 F447 F466 A467 W468 V469 Q501 N552 Y572 Y574
Binding residue
(residue number reindexed from 1)		Q14 N29 Q30 A31 S34 S272 R418 F447 F466 A467 W468 V469 Q501 N552 Y572 Y574
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:1904680 peptide transmembrane transporter activity
Biological Process
GO:0015833 peptide transport
GO:0055085 transmembrane transport
Cellular Component
GO:0030288 outer membrane-bounded periplasmic space
GO:0042597 periplasmic space
GO:0043190 ATP-binding cassette (ABC) transporter complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2d5w, PDBe:2d5w, PDBj:2d5w
PDBsum2d5w
PubMed
UniProtQ5SHU6

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