Structure of PDB 2d5f Chain B Binding Site BS01

Receptor Information
>2d5f Chain B (length=385) Species: 3847 (Glycine max) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NECQLNNLNALEPDHRVESEGGLIETWNSQHPELQCAGVTVSKRTLNRNG
LHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQLQDSHQKIRHFN
EGDVLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYLAGN
PDIEHPETMQEGGSVLSGFSKHFLAQSFNTNEDTAEKLRSPDDERKQIVT
VEGGLSVISPKWGVEENICTMKLHENIARPSRADFYNPKAGRISTLNSLT
LPALRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNCQG
NAVFDGELRRGQLLVVPQNFVVAEQGGEQGLEYVVFKTHHNAVSSYIKDV
FRAIPSEVLSNSYNLGQSQVRQLKYQGNSGPLVNP
Ligand information
Ligand IDCO3
InChIInChI=1S/CH2O3/c2-1(3)4/h(H2,2,3,4)/p-2
InChIKeyBVKZGUZCCUSVTD-UHFFFAOYSA-L
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(=O)([O-])[O-]
ACDLabs 10.04
CACTVS 3.341		[O-]C([O-])=O
FormulaC O3
NameCARBONATE ION
ChEMBL
DrugBankDB14531
ZINC
PDB chain2d5f Chain B Residue 502 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB2d5f Conservation and divergence on plant seed 11S globulins based on crystal structures.
Resolution1.9 Å
Binding residue
(original residue number in PDB)		R50 H58 Y131 T133
Binding residue
(residue number reindexed from 1)		R44 H52 Y113 T115
Annotation score3
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0045735 nutrient reservoir activity

View graph for
Molecular Function
External links
PDB RCSB:2d5f, PDBe:2d5f, PDBj:2d5f
PDBsum2d5f
PubMed20215054
UniProtP04347|GLYG5_SOYBN Glycinin G5 (Gene Name=GY5)

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