Structure of PDB 2c9f Chain B Binding Site BS01

Receptor Information
>2c9f Chain B (length=440) Species: 10515 (Human adenovirus 2) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RNSIRYSELAPLFDTTRVYLVDNKSTDVASLNYQNDHSNFLTTVIQNNDY
SPGEASTQTINLDDRSHWGGDLKTILHTNMPNVNEFMFTNKFKARVMVSR
SLTKDKQVELKYEWVEFTLPEGNYSETMTIDLMNNAIVEHYLKVGRQNGV
LESDIGVKFDTRNFRLGFDPVTGLVMPGVYTNEAFHPDIILLPGCGVDFT
HSRLSNLLGIRKRQPFQEGFRITYDDLEGGNIPALLDVDAYQASLKKPVI
KPLTEDSKKRSYNLISNDSTFTQYRSWYLAYNYGDPQTGIRSWTLLCTPD
VTCGSEQVYWSLPDMMQDPVTFRSTSQISNFPVVGAELLPVHSKSFYNDQ
AVYSQLIRQFTSLTHVFNRFPENQILARPPAPTITTVSENVPALTDHGTL
PLRNSIGGVQRVTITDARRRTCPYVYKALGIVSPRVLSSR
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB2c9f Structure of the Dodecahedral Penton Particle from Human Adenovirus Type 3.
Resolution16.5 Å
Binding residue
(original residue number in PDB)		M227 P228
Binding residue
(residue number reindexed from 1)		M176 P177
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Biological Process
GO:0019062 virion attachment to host cell
GO:0046718 symbiont entry into host cell
GO:0075509 endocytosis involved in viral entry into host cell
GO:0075512 clathrin-dependent endocytosis of virus by host cell
Cellular Component
GO:0039623 T=25 icosahedral viral capsid
GO:0042025 host cell nucleus

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:2c9f, PDBe:2c9f, PDBj:2c9f
PDBsum2c9f
PubMed16375921
UniProtP03276|CAPSP_ADE02 Penton protein (Gene Name=L2)

[Back to BioLiP]