Structure of PDB 2bpi Chain B Binding Site BS01

Receptor Information

>2bpi Chain B (length=197) Species: 36329 (Plasmodium falciparum 3D7) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

VITLPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKDTPFAEK
SLLDIVKESSGAIFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDF
GSFNNFKEQFSNILCGHFGSGWGWLALNNNNKLVILQTHDAGNPIKDNTG
IPILTCDIWEHAYYIDYRNDRASYVKAWWNLVNWNFANENLKKAMQK

Ligand information

Ligand ID

InChI

InChI=1S/Fe/q+3

InChIKey

VTLYFUHAOXGGBS-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 CACTVS 3.341 OpenEye OEToolkits 1.5.0	[Fe+3]

Formula

Name

FE (III) ION

PDB chain

2bpi Chain B Residue 1198 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	2bpi The Crystal Structure of Superoxide Dismutase from Plasmodium Falciparum.
Resolution	2.52 Å
Binding residue (original residue number in PDB)	H26 H73 D157 H161
Binding residue (residue number reindexed from 1)	H26 H73 D157 H161
Annotation score	1

Enzymatic activity

Enzyme Commision number

1.15.1.1: superoxide dismutase.

Gene Ontology

	Molecular Function
GO:0004784	superoxide dismutase activity
GO:0005515	protein binding
GO:0016491	oxidoreductase activity
GO:0046872	metal ion binding

	Biological Process
GO:0006801	superoxide metabolic process
GO:0006979	response to oxidative stress
GO:0019430	removal of superoxide radicals

	Cellular Component
GO:0005737	cytoplasm
GO:0005829	cytosol

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component

External links

PDB	RCSB:2bpi, PDBe:2bpi, PDBj:2bpi
PDBsum	2bpi
PubMed	17020617
UniProt	Q8IAY6\|SODF_PLAF7 Superoxide dismutase [Fe] (Gene Name=SODB)

[Back to BioLiP]