Structure of PDB 1y8z Chain B Binding Site BS01

Receptor Information
>1y8z Chain B (length=373) Species: 10665 (Tequatrovirus T4) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GSMRICIFMARGLEGCGVTKFSLEQRDWFIKNGHEVTLVYAKDKSFTRTS
SHDHKSFSIPVILAKEYDKALKLVNDCDILIINSVPATSVQEATINNYKK
LLDNIKPSIRVVVYQHDHSVLSLRRNLGLEETVRRADVIFSHSVYNFQPP
MDIVKVRSTYWKDVSEINMNINRWIGRTTTWKGFYQMFDFHEKFLKPAGK
STVMEGLERSPAFIAIKEKGIPYEYYGNREIDKMNLAPNQPAQILDCYIN
SEMLERMSKSGFGYQLSKLNQKYLQRSLEYTHLELGACGTIPVFWKSTGE
NLKFRVDNTPLTSHDSGIIWFDENDMESTFERIKELSSDRALYDREREKA
YEFLYQHQDSSFCFKEQFDIITK
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1y8z Structural evidence of a passive base-flipping mechanism for AGT, an unusual GT-B glycosyltransferase.
Resolution1.9 Å
Binding residue
(original residue number in PDB)		S1117 L1119 R1123 W1208 P1238
Binding residue
(residue number reindexed from 1)		S119 L121 R125 W181 P211
Enzymatic activity
Enzyme Commision number 2.4.1.26: DNA alpha-glucosyltransferase.
Gene Ontology
Molecular Function
GO:0016757 glycosyltransferase activity
GO:0033820 DNA alpha-glucosyltransferase activity
Biological Process
GO:0006304 DNA modification
GO:0019049 virus-mediated perturbation of host defense response
GO:0039504 symbiont-mediated suppression of host adaptive immune response
GO:0098672 symbiont-mediated suppression of host CRISPR-cas system
GO:0099018 symbiont-mediated evasion of host restriction-modification system

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Molecular Function
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Biological Process
External links
PDB RCSB:1y8z, PDBe:1y8z, PDBj:1y8z
PDBsum1y8z
PubMed16081100
UniProtP04519|GSTA_BPT4 DNA alpha-glucosyltransferase (Gene Name=agt)

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