Structure of PDB 1w4z Chain B Binding Site BS01
Receptor Information
>1w4z Chain B (length=261) Species:
1902
(Streptomyces coelicolor) [
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LVPRGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGL
RTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGR
PGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIA
STGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETP
MAASVREHYTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGAAAVTAQ
ALNVCGGLGNY
Ligand information
Ligand ID
NAP
InChI
InChI=1S/C21H28N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1-4,7-8,10-11,13-16,20-21,29-31H,5-6H2,(H7-,22,23,24,25,32,33,34,35,36,37,38,39)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
XJLXINKUBYWONI-NNYOXOHSSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O[P](O)(O)=O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@@](O)(=O)OC[C@H]3O[C@H]([C@H](O[P](O)(O)=O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
Formula
C21 H28 N7 O17 P3
Name
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE;
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE
ChEMBL
CHEMBL295069
DrugBank
DB03461
ZINC
PDB chain
1w4z Chain B Residue 1262 [
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Receptor-Ligand Complex Structure
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PDB
1w4z
The Crystal Structure of the Actiii Actinorhodin Polyketide Reductase; Proposed Mechanism for Acp and Polyketide Binding
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
G13 T15 S16 I18 R38 G39 D63 V64 N90 A91 G92 S144 Y157 K161 P187 G188 V190 T192 M194
Binding residue
(residue number reindexed from 1)
G20 T22 S23 I25 R45 G46 D70 V71 N97 A98 G99 S151 Y164 K168 P194 G195 V197 T199 M201
Annotation score
4
Enzymatic activity
Catalytic site (original residue number in PDB)
G17 N114 S144 Y157 K161 Y202
Catalytic site (residue number reindexed from 1)
G24 N121 S151 Y164 K168 Y209
Enzyme Commision number
1.3.1.-
Gene Ontology
Molecular Function
GO:0016491
oxidoreductase activity
Biological Process
GO:0008202
steroid metabolic process
GO:0017000
antibiotic biosynthetic process
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:1w4z
,
PDBe:1w4z
,
PDBj:1w4z
PDBsum
1w4z
PubMed
15458634
UniProt
P16544
|ACT3_STRCO Putative ketoacyl reductase (Gene Name=actIII)
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