Structure of PDB 1slt Chain B Binding Site BS01

Receptor Information

>1slt Chain B (length=132) Species: 9913 (Bos taurus)

GLVASNLNLKPGECLRVRGEVAADAKSFLLNLGKDDNNLCLHFNPRFNAH
GDVNTIVCNSKDAGAWGAEQRESAFPFQPGSVVEVCISFNQTDLTIKLPD
GYEFKFPNRLNLEAINYLSAGGDFKIKCVAFE

Ligand information

• Ligand ID: GAL
• InChI: InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3+,4+,5-,6-/m1/s1
• InChIKey: WQZGKKKJIJFFOK-FPRJBGLDSA-N
• SMILES:
  CACTVS 3.370: OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@H]1O
  OpenEye OEToolkits 1.7.2: C(C1C(C(C(C(O1)O)O)O)O)O
  CACTVS 3.370: OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
  ACDLabs 12.01: OC1C(O)C(OC(O)C1O)CO
  OpenEye OEToolkits 1.7.2: C([C@@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)O
• Formula: C6 H12 O6
• Name: beta-D-galactopyranose;
  beta-D-galactose;
  D-galactose;
  galactose
• ChEMBL: CHEMBL300520
• ZINC: ZINC000002597049
• PDB chain: 1slt Chain D Residue 2

Receptor-Ligand Complex Structure

Structure summary

• PDB: 1slt Structure of S-lectin, a developmentally regulated vertebrate beta-galactoside-binding protein.
• Resolution: 1.9 Å
• Binding residue (original residue number in PDB): H44 R48 W68 E71
• Binding residue (residue number reindexed from 1): H42 R46 W66 E69
• Annotation score: 4

Gene Ontology

Molecular Function

• GO:0030246 carbohydrate binding
• GO:0030395 lactose binding
• GO:0043236 laminin binding

Biological Process

• GO:0006915 apoptotic process

Cellular Component

• GO:0005576 extracellular region
• GO:0005615 extracellular space
• GO:0005737 cytoplasm

External links

• PDB: RCSB:1slt, PDBe:1slt, PDBj:1slt
• PDBsum: 1slt
• PubMed: 8108426
• UniProt: P11116|LEG1_BOVIN Galectin-1 (Gene Name=LGALS1)