Structure of PDB 1pvi Chain B Binding Site BS01
Receptor Information
>1pvi Chain B (length=156) Species:
585
(Proteus vulgaris) [
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SHPDLNKLLELWPHIQEYQDLALKHGINDIFQDNGGKLLQVLLITGLTVL
PGREGNDAVDNAGQEYELKSINIDLTKGFSTHHHMNPVIIAKYRQVPWIF
AIYRGIAIEAIYRLEPKDLEFYYDKWERKWYSDGHKDINNPKIPVKYVME
HGTKIY
Ligand information
>1pvi Chain C (length=13) [
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tgaccagctggtc
Receptor-Ligand Complex Structure
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PDB
1pvi
Structure of PvuII endonuclease with cognate DNA.
Resolution
2.6 Å
Binding residue
(original residue number in PDB)
D34 N35 G56 N57 K70 S71 L76 T77 H83 H84 N141 K143
Binding residue
(residue number reindexed from 1)
D33 N34 G55 N56 K69 S70 L75 T76 H82 H83 N140 K142
Enzymatic activity
Catalytic site (original residue number in PDB)
D58 E68 K70
Catalytic site (residue number reindexed from 1)
D57 E67 K69
Enzyme Commision number
3.1.21.4
: type II site-specific deoxyribonuclease.
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0004519
endonuclease activity
GO:0009036
type II site-specific deoxyribonuclease activity
GO:0046872
metal ion binding
Biological Process
GO:0009307
DNA restriction-modification system
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Molecular Function
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Biological Process
External links
PDB
RCSB:1pvi
,
PDBe:1pvi
,
PDBj:1pvi
PDBsum
1pvi
PubMed
8076590
UniProt
P23657
|T2P2_PROHU Type II restriction enzyme PvuII (Gene Name=pvuIIR)
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