Structure of PDB 1or6 Chain B Binding Site BS01
Receptor Information
>1or6 Chain B (length=156) Species:
1423
(Bacillus subtilis) [
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NRIQLTNKHADVKKQLKMVRLGDAELYVLEQLQPLIQENIVNIVDAFYKN
LDHESSLMDIINDHSSVDRLKQTLKRHIQEMFAGVIDDEFIEKRNRIASI
HLRIGLLPKWYMGAFQELLLSMIDIYEASITNQQELLKAIKATTKILNLE
QQLVLE
Ligand information
Ligand ID
HEM
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);/q;+2/p-2/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;
InChIKey
KABFMIBPWCXCRK-RGGAHWMASA-L
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
Cc1c2n3c(c1CCC(=O)O)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C)C=C)C(=C(C7=C2)C)C=C)C)CCC(=O)O
CACTVS 3.385
CC1=C(CCC(O)=O)C2=Cc3n4[Fe]5|6|N2=C1C=c7n5c(=CC8=N|6C(=Cc4c(C)c3CCC(O)=O)C(=C8C=C)C)c(C)c7C=C
ACDLabs 12.01
C=1c3c(c(c4C=C5C(=C(C=6C=C7C(=C(C8=CC=2C(=C(C=1N=2[Fe](n34)(N5=6)N78)CCC(=O)O)C)\C=C)C)\C=C)C)C)CCC(=O)O
Formula
C34 H32 Fe N4 O4
Name
PROTOPORPHYRIN IX CONTAINING FE;
HEME
ChEMBL
DrugBank
DB18267
ZINC
PDB chain
1or6 Chain B Residue 180 [
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Receptor-Ligand Complex Structure
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PDB
1or6
Structure of the oxygen sensor in Bacillus subtilis: signal transduction of chemotaxis by control of symmetry.
Resolution
2.71 Å
Binding residue
(original residue number in PDB)
F69 L79 I83 H86 S87 L92 T95 H99 I119 I122 H123 I126 L128 F137
Binding residue
(residue number reindexed from 1)
F47 L57 I61 H64 S65 L70 T73 H77 I97 I100 H101 I104 L106 F115
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0019825
oxygen binding
GO:0020037
heme binding
View graph for
Molecular Function
External links
PDB
RCSB:1or6
,
PDBe:1or6
,
PDBj:1or6
PDBsum
1or6
PubMed
12962628
UniProt
O07621
|HEMAT_BACSU Heme-based aerotactic transducer HemAT (Gene Name=hemAT)
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