Structure of PDB 1ogp Chain B Binding Site BS01

Receptor Information
>1ogp Chain B (length=388) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PGIRGPSEYSQEPPRHPSLKVNAKEPFNAEPPRSALVSSYVTPVDLFYKR
NHGPIPIVDHLQSYSVTLTGLIQNPRKLFIKDIRSLPKYNVTATLQCAGN
RRTAMSKVRNVRGVGWDVSAIGNAVWGGAKLADVLELVGIPKLTASTNLG
ARHVEFVSVDRCKEENGGPYKASITLSQATNPEADVLLAYEMNGETLNRD
HGFPLRVVVPGVIGARSVKWLDSINVIAEESQGFFMQKDYKMFPPSVNWD
NINWSSRRPQMDFPVQSAICSVEDVQMVKPGKVSIKGYAVSGGGRGIERV
DISLDGGKNWVEASRTQEPGKQYISEHSSSDKWAWVLFEATIDVSQTTEV
IAKAVDSAANVQPENVESVWNLRGVLNTSWHRVLLRLG
Ligand information
Ligand IDMTQ
InChIInChI=1S/C10H10N5O6PS2.Mo.2O/c11-10-14-7-4(8(16)15-10)12-3-6(24)5(23)2(21-9(3)13-7)1-20-22(17,18)19;;;/h9,23-24H,1H2,(H2,17,18,19)(H3,11,13,14,15,16);;;/q;+2;;/p-2/t9-;;;/m1.../s1
InChIKeyIXNYCVJPVGNGQC-NRYJBHHQSA-L
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(C1=C2C(=C3C(O1)NC4=NC(=NC(=O)C4=N3)N)S[Mo](=O)(=O)S2)OP(=O)(O)O
ACDLabs 10.04O=C2N=C(N=C3NC4OC(=C1S[Mo](=O)(=O)SC1=C4N=C23)COP(=O)(O)O)N
OpenEye OEToolkits 1.5.0C(C1=C2C(=C3[C@@H](O1)NC4=NC(=NC(=O)C4=N3)N)S[Mo](=O)(=O)S2)OP(=O)(O)O
CACTVS 3.341NC1=NC(=O)C2=NC3=C4S[Mo](=O)(=O)SC4=C(CO[P](O)(O)=O)O[C@H]3NC2=N1
CACTVS 3.341NC1=NC(=O)C2=NC3=C4S[Mo](=O)(=O)SC4=C(CO[P](O)(O)=O)O[CH]3NC2=N1
FormulaC10 H8 Mo N5 O8 P S2
Name(MOLYBDOPTERIN-S,S)-DIOXO-THIO-MOLYBDENUM(VI)
ChEMBL
DrugBank
ZINC
PDB chain1ogp Chain B Residue 1394 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1ogp The Crystal Structure of Plant Sulfite Oxidase Provides Insights Into Sulfite Oxidation in Plants and Animals
Resolution2.6 Å
Binding residue
(original residue number in PDB)
Y49 R51 N52 H53 C98 A99 S159 D161 Y171 H202 R207 G215 A216 S218 V219 K220 W221 Y241
Binding residue
(residue number reindexed from 1)
Y48 R50 N51 H52 C97 A98 S158 D160 Y170 H201 R206 G214 A215 S217 V218 K219 W220 Y240
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) R51 C98 D240 Y241
Catalytic site (residue number reindexed from 1) R50 C97 D239 Y240
Enzyme Commision number 1.8.3.1: sulfite oxidase.
Gene Ontology
Molecular Function
GO:0008482 sulfite oxidase activity
GO:0016491 oxidoreductase activity
GO:0030151 molybdenum ion binding
GO:0046872 metal ion binding
Biological Process
GO:0006790 sulfur compound metabolic process
GO:0010477 response to sulfur dioxide
GO:0015994 chlorophyll metabolic process
Cellular Component
GO:0005739 mitochondrion
GO:0005777 peroxisome
GO:0005829 cytosol

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:1ogp, PDBe:1ogp, PDBj:1ogp
PDBsum1ogp
PubMed14527393
UniProtQ9S850|SUOX_ARATH Sulfite oxidase (Gene Name=SOX)

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