Structure of PDB 1od5 Chain B Binding Site BS01

Receptor Information
>1od5 Chain B (length=382) Species: 3847 (Glycine max) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NECQLNNLNALEPDHRVESEGGLIETWNSQHPELQCAGVTVSKRTLNRNG
LHLPSYSPYPQMIIVVQGKGAIGFAFPGCPETFEKPQDSHQKIRHFNEGD
VLVIPPGVPYWTYNTGDEPVVAISLLDTSNFNNQLDQNPRVFYLAGNPDI
EHPETMQEGGSVLSGFSKHFLAQSFNTNEDTAEKLRSPDDERKQIVTVEG
GLSVISPKWGVEENICTMKLHENIARPSRADFYNPKAGRISTLNSLTLPA
LRQFGLSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNCQGNAV
FDGELRRGQLLVVPQNFVVAEQGGEQGLEYVVFKTHHNAVSSYIKDVFRA
IPSEVLSNSYNLGQSQVRQLKYQGNSGPLVNP
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain1od5 Chain A Residue 498 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1od5 Crystal Structure of Soybean 11S Globulin: Glycinin A3B4 Homohexamer
Resolution2.1 Å
Binding residue
(original residue number in PDB)		H383 E432
Binding residue
(residue number reindexed from 1)		H272 E321
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0045735 nutrient reservoir activity

View graph for
Molecular Function
External links
PDB RCSB:1od5, PDBe:1od5, PDBj:1od5
PDBsum1od5
PubMed12771376
UniProtP04347|GLYG5_SOYBN Glycinin G5 (Gene Name=GY5)

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