Structure of PDB 1j4u Chain B Binding Site BS01
Receptor Information
>1j4u Chain B (length=149) Species:
3490
(Artocarpus integer) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
ASQTITVGSWGGPGGNGWDEGSYTGIRQIELSYKEAIGSFSVIYDLNGDP
FSGPKHTSKLPYKNVKIELKFPDEFLESVSGYTGPFSALATPTPVVRSLT
FKTNKGRTFGPYGDEEGTYFNLPIENGLIVGFKGRTGDLLDAIGIHMSL
Ligand information
Ligand ID
MMA
InChI
InChI=1S/C7H14O6/c1-12-7-6(11)5(10)4(9)3(2-8)13-7/h3-11H,2H2,1H3/t3-,4-,5+,6+,7+/m1/s1
InChIKey
HOVAGTYPODGVJG-VEIUFWFVSA-N
SMILES
Software
SMILES
CACTVS 3.341
CO[C@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]1O
ACDLabs 10.04
OC1C(O)C(O)C(OC1OC)CO
OpenEye OEToolkits 1.5.0
CO[C@@H]1[C@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O
CACTVS 3.341
CO[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.5.0
COC1C(C(C(C(O1)CO)O)O)O
Formula
C7 H14 O6
Name
methyl alpha-D-mannopyranoside;
O1-METHYL-MANNOSE;
methyl alpha-D-mannoside;
methyl D-mannoside;
methyl mannoside
ChEMBL
CHEMBL195368
DrugBank
DB01979
ZINC
ZINC000004261920
PDB chain
1j4u Chain B Residue 402 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1j4u
Crystal structures of artocarpin, a Moraceae lectin with mannose specificity, and its complex with methyl-alpha-D-mannose: implications to the generation of carbohydrate specificity.
Resolution
2.9 Å
Binding residue
(original residue number in PDB)
G14 G15 D138 D141
Binding residue
(residue number reindexed from 1)
G14 G15 D138 D141
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0030246
carbohydrate binding
View graph for
Molecular Function
External links
PDB
RCSB:1j4u
,
PDBe:1j4u
,
PDBj:1j4u
PDBsum
1j4u
PubMed
11902840
UniProt
Q7M1T4
[
Back to BioLiP
]