Structure of PDB 1io9 Chain B Binding Site BS01
Receptor Information
>1io9 Chain B (length=354) Species:
2287
(Saccharolobus solfataricus) [
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MYDWFSEMRKKDPVYYDGNIWQVFSYRYTKEVLNNFSKFSSDLTGYHERL
EDLRNGKIRFDIPTRYTMLTSDPPLHDELRSMSADIFSPQKLQTLETFIR
ETTRSLLDSIDPREDDIVKKLAVPLPIIVISKILGLPIEDKEKFKEWSDL
VLGKKYLELIGYVKDHLNSGTEVVSRVVNSNLSDIEKLGYIILLLIAGNE
TTTNLISNSVIDFTRFNLWQRIREENLYLKAIEEALRYSPPVMRTVRKTK
ERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRNPNPHLSFGS
GIHLCLGAPLARLEARIAIEEFSKRFRHIEILDTEKVPNEVLNGYKRLVV
RLKS
Ligand information
Ligand ID
HEM
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);/q;+2/p-2/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;
InChIKey
KABFMIBPWCXCRK-RGGAHWMASA-L
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
Cc1c2n3c(c1CCC(=O)O)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C)C=C)C(=C(C7=C2)C)C=C)C)CCC(=O)O
CACTVS 3.385
CC1=C(CCC(O)=O)C2=Cc3n4[Fe]5|6|N2=C1C=c7n5c(=CC8=N|6C(=Cc4c(C)c3CCC(O)=O)C(=C8C=C)C)c(C)c7C=C
ACDLabs 12.01
C=1c3c(c(c4C=C5C(=C(C=6C=C7C(=C(C8=CC=2C(=C(C=1N=2[Fe](n34)(N5=6)N78)CCC(=O)O)C)\C=C)C)\C=C)C)C)CCC(=O)O
Formula
C34 H32 Fe N4 O4
Name
PROTOPORPHYRIN IX CONTAINING FE;
HEME
ChEMBL
DrugBank
DB18267
ZINC
PDB chain
1io9 Chain B Residue 901 [
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Receptor-Ligand Complex Structure
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PDB
1io9
Thermophilic cytochrome P450 (CYP119) from Sulfolobus solfataricus: high resolution structure and functional properties.
Resolution
2.05 Å
Binding residue
(original residue number in PDB)
L569 H576 R580 A709 G710 T713 P753 T757 R759 S809 F810 H815 C817 L818 G819
Binding residue
(residue number reindexed from 1)
L69 H76 R80 A197 G198 T201 P241 T245 R247 S297 F298 H303 C305 L306 G307
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
A709 E712 T713 T714 C817 L818 G819 E826 L854
Catalytic site (residue number reindexed from 1)
A197 E200 T201 T202 C305 L306 G307 E314 L342
Enzyme Commision number
1.11.1.7
: peroxidase.
1.14.-.-
Gene Ontology
Molecular Function
GO:0004497
monooxygenase activity
GO:0004601
peroxidase activity
GO:0005506
iron ion binding
GO:0016705
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037
heme binding
GO:0046872
metal ion binding
GO:0140825
lactoperoxidase activity
Biological Process
GO:0098869
cellular oxidant detoxification
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:1io9
,
PDBe:1io9
,
PDBj:1io9
PDBsum
1io9
PubMed
12237217
UniProt
Q55080
|CP119_SULAC Cytochrome P450 119 (Gene Name=cyp119)
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