Structure of PDB 1io7 Chain B Binding Site BS01
Receptor Information
>1io7 Chain B (length=359) Species:
2287
(Saccharolobus solfataricus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MYDWFSEMRKKDPVYYDGNIWQVFSYRYTKEVLNNFSKFSSDLTGYHERL
EDLRNGKIRFDIPTRYTMLTSDPPLHDELRSMSADIFSPQKLQTLETFIR
ETTRSLLDSIDPREDDIVKKLAVPLPIIVISKILGLPIEDKEKFKEWSDL
VAFRFELGKKYLELIGYVKDHLNSGTEVVSRVVNSNLSDIEKLGYIILLL
IAGNETTTNLISNSVIDFTRFNLWQRIREENLYLKAIEEALRYSPPVMRT
VRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIPDRNPNPH
LSFGSGIHLCLGAPLARLEARIAIEEFSKRFRHIEILDTEKVPNEVLNGY
KRLVVRLKS
Ligand information
Ligand ID
HEM
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,1-2,9-12H2,3-6H3,(H4,35,36,37,38,39,40,41,42);/q;+2/p-2/b25-13-,26-13-,27-14-,28-15-,29-14-,30-15-,31-16-,32-16-;
InChIKey
KABFMIBPWCXCRK-RGGAHWMASA-L
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
Cc1c2n3c(c1CCC(=O)O)C=C4C(=C(C5=[N]4[Fe]36[N]7=C(C=C8N6C(=C5)C(=C8C)C=C)C(=C(C7=C2)C)C=C)C)CCC(=O)O
CACTVS 3.385
CC1=C(CCC(O)=O)C2=Cc3n4[Fe]5|6|N2=C1C=c7n5c(=CC8=N|6C(=Cc4c(C)c3CCC(O)=O)C(=C8C=C)C)c(C)c7C=C
ACDLabs 12.01
C=1c3c(c(c4C=C5C(=C(C=6C=C7C(=C(C8=CC=2C(=C(C=1N=2[Fe](n34)(N5=6)N78)CCC(=O)O)C)\C=C)C)\C=C)C)C)CCC(=O)O
Formula
C34 H32 Fe N4 O4
Name
PROTOPORPHYRIN IX CONTAINING FE;
HEME
ChEMBL
DrugBank
DB18267
ZINC
PDB chain
1io7 Chain B Residue 901 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1io7
Thermophilic cytochrome P450 (CYP119) from Sulfolobus solfataricus: high resolution structure and functional properties.
Resolution
1.5 Å
Binding residue
(original residue number in PDB)
M568 H576 R580 F587 L705 A709 G710 T713 T714 L717 T757 R759 S809 F810 H815 C817 G819 A823
Binding residue
(residue number reindexed from 1)
M68 H76 R80 F87 L198 A202 G203 T206 T207 L210 T250 R252 S302 F303 H308 C310 G312 A316
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
F653 A709 E712 T713 T714 C817 L818 G819 E826 L854
Catalytic site (residue number reindexed from 1)
F153 A202 E205 T206 T207 C310 L311 G312 E319 L347
Enzyme Commision number
1.11.1.7
: peroxidase.
1.14.-.-
Gene Ontology
Molecular Function
GO:0004497
monooxygenase activity
GO:0004601
peroxidase activity
GO:0005506
iron ion binding
GO:0016705
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037
heme binding
GO:0046872
metal ion binding
GO:0140825
lactoperoxidase activity
Biological Process
GO:0098869
cellular oxidant detoxification
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1io7
,
PDBe:1io7
,
PDBj:1io7
PDBsum
1io7
PubMed
12237217
UniProt
Q55080
|CP119_SULAC Cytochrome P450 119 (Gene Name=cyp119)
[
Back to BioLiP
]