Structure of PDB 1ign Chain B Binding Site BS01
Receptor Information
>1ign Chain B (length=189) Species:
4932
(Saccharomyces cerevisiae) [
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KASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYVPNHTGNSIRHRFRV
YLSKRLEYVYEVDKFGKLVRDDDGNLIKTKVLPPSIKRKFSADEDYTLAI
AVKKQFYRDLFQIDPDTGRSLIRTQSRRGPIAREFFKHFAEEHAAHTENA
WRDRFRKFLLAYGIDDYISYYEAEEPMKNLTPTPGNYNS
Ligand information
>1ign Chain E (length=18) [
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cgcacacccacacaccag
Receptor-Ligand Complex Structure
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PDB
1ign
The crystal structure of the DNA-binding domain of yeast RAP1 in complex with telomeric DNA.
Resolution
2.25 Å
Binding residue
(original residue number in PDB)
K360 A361 S362 F363 H398 T399 N401 S402 H405 R406 Y410 K446 R447 F449 H536 T537 N539 A540 D543 R544 F548 K575 N576 T578 T588 P589 G590 N591 N593 S594
Binding residue
(residue number reindexed from 1)
K1 A2 S3 F4 H39 T40 N42 S43 H46 R47 Y51 K87 R88 F90 H146 T147 N149 A150 D153 R154 F158 K178 N179 T181 T183 P184 G185 N186 N188 S189
Binding affinity
PDBbind-CN
: Kd=13pM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
Biological Process
GO:0000723
telomere maintenance
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Molecular Function
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Biological Process
External links
PDB
RCSB:1ign
,
PDBe:1ign
,
PDBj:1ign
PDBsum
1ign
PubMed
8620531
UniProt
P11938
|RAP1_YEAST DNA-binding protein RAP1 (Gene Name=RAP1)
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