Structure of PDB 1h65 Chain B Binding Site BS01

Receptor Information
>1h65 Chain B (length=256) Species: 3888 (Pisum sativum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TVREWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTV
NSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDM
ALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNK
AIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLKKDAQASDIPV
VLIENSGRCNKNDSDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKNL
IDKLAA
Ligand information
Ligand IDGDP
InChIInChI=1S/C10H15N5O11P2/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(25-9)1-24-28(22,23)26-27(19,20)21/h2-3,5-6,9,16-17H,1H2,(H,22,23)(H2,19,20,21)(H3,11,13,14,18)/t3-,5-,6-,9-/m1/s1
InChIKeyQGWNDRXFNXRZMB-UUOKFMHZSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.6c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N=C(NC2=O)N
CACTVS 3.385NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO[P](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
CACTVS 3.385NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 12.01O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c2N=C(N)NC1=O)C(O)C3O
OpenEye OEToolkits 1.7.6c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N=C(NC2=O)N
FormulaC10 H15 N5 O11 P2
NameGUANOSINE-5'-DIPHOSPHATE
ChEMBLCHEMBL384759
DrugBankDB04315
ZINCZINC000008215481
PDB chain1h65 Chain B Residue 281 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1h65 Crystal Structure of Pea Toc34 - a Novel Gtpase of the Chloroplast Protein Translocon
Resolution2.0 Å
Binding residue
(original residue number in PDB)		G49 V50 G51 K52 S53 S54 I67 S68 P69 E73 H163 E210
Binding residue
(residue number reindexed from 1)		G43 V44 G45 K46 S47 S48 I61 S62 P63 E67 H157 E204
Annotation score4
Enzymatic activity
Enzyme Commision number 3.6.5.-
Gene Ontology
Molecular Function
GO:0005525 GTP binding
GO:0015450 protein-transporting ATPase activity
Biological Process
GO:0006886 intracellular protein transport
Cellular Component
GO:0009707 chloroplast outer membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:1h65, PDBe:1h65, PDBj:1h65
PDBsum1h65
PubMed11753431
UniProtQ41009|TOC34_PEA Translocase of chloroplast 34 (Gene Name=TOC34)

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