Structure of PDB 1gji Chain B Binding Site BS01

Receptor Information

>1gji Chain B (length=275) Species: 9031 (Gallus gallus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

PYIEIFEQPRQRGMRFRYKCEGRSAGSIPGEHSTDNNKTFPSIQILNYFG
KVKIRTTLVTKNEPYKPHPHDLVGKDCRDGYYEAEFGPERRVLSFQNLGI
QCVKKKDLKESISLRISKKINPFNVPEEQLHNIDEYDLNVVRLCFQAFLP
DEHGNYTLALPPLISNPIYDNRAPNTAELRICRVNKNCGSVKGGDEIFIL
CDKVQKDDIEVRFVLDNWEAKGSFSQADVHRQVAIVFRTPPFLRDITEPI
TVKMQLRRPSDQEVSEPMDFRYLPD

Ligand information

>1gji Chain C (length=20) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

gggtttaaagaaattccaga

Receptor-Ligand Complex Structure

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Structure summary

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PDB	1gji X-ray crystal structure of proto-oncogene product c-Rel bound to the CD28 response element of IL-2.
Resolution	2.85 Å
Binding residue (original residue number in PDB)	R21 S30 G32
Binding residue (residue number reindexed from 1)	R15 S24 G26
Binding affinity	PDBbind-CN: Kd=25nM

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0003677	DNA binding
GO:0003700	DNA-binding transcription factor activity

	Biological Process
GO:0006355	regulation of DNA-templated transcription

	Cellular Component
GO:0005737	cytoplasm

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Cellular Component

External links

PDB	RCSB:1gji, PDBe:1gji, PDBj:1gji
PDBsum	1gji
PubMed	11587641
UniProt	P16236\|REL_CHICK Proto-oncogene c-Rel (Gene Name=REL)

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