Structure of PDB 1ee0 Chain B Binding Site BS01

Receptor Information
>1ee0 Chain B (length=375) Species: 18101 (Gerbera hybrid cultivar) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GLATILAIGTATPPNCVAQADYADYYFRVTKSEHMVDLKEKFKRICEKTA
IKKRYLALTEDYLQENPTMCEFMAPSLNARQDLVVTGVPMLGKEAAVKAI
DEWGLPKSKITHLIFCTTAGVDMPGADYQLVKLLGLSPSVKRYMLYQQGC
AAGGTVLRLAKDLAENNKGSRVLIVCSEITAILFHGPNENHLDSLVAQAL
FGDGAAALIVGSGPHLAVERPIFEIVSTDQTILPDTEKAMKLHLREGGLT
FQLHRDVPLMVAKNIENAAEKALSPLGITDWNSVFWMVHPGGRAILDQVE
RKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKRSMAEGKSTTGEG
LDCGVLFGFGPGMTVETVVLRSVRV
Ligand information
Ligand IDCAA
InChIInChI=1S/C25H40N7O18P3S/c1-13(33)8-16(35)54-7-6-27-15(34)4-5-28-23(38)20(37)25(2,3)10-47-53(44,45)50-52(42,43)46-9-14-19(49-51(39,40)41)18(36)24(48-14)32-12-31-17-21(26)29-11-30-22(17)32/h11-12,14,18-20,24,36-37H,4-10H2,1-3H3,(H,27,34)(H,28,38)(H,42,43)(H,44,45)(H2,26,29,30)(H2,39,40,41)/t14-,18-,19-,20+,24-/m1/s1
InChIKeyOJFDKHTZOUZBOS-CITAKDKDSA-N
SMILES
SoftwareSMILES
CACTVS 3.341CC(=O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)CO[P@@](O)(=O)O[P@@](O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O[P](O)(O)=O)n2cnc3c(N)ncnc23
CACTVS 3.341CC(=O)CC(=O)SCCNC(=O)CCNC(=O)[CH](O)C(C)(C)CO[P](O)(=O)O[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O[P](O)(O)=O)n2cnc3c(N)ncnc23
OpenEye OEToolkits 1.5.0CC(=O)CC(=O)SCCNC(=O)CCNC(=O)[C@@H](C(C)(C)CO[P@](=O)(O)O[P@](=O)(O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)O
OpenEye OEToolkits 1.5.0CC(=O)CC(=O)SCCNC(=O)CCNC(=O)C(C(C)(C)COP(=O)(O)OP(=O)(O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)O
ACDLabs 10.04O=C(C)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3OP(=O)(O)O
FormulaC25 H40 N7 O18 P3 S
NameACETOACETYL-COENZYME A
ChEMBL
DrugBankDB03059
ZINCZINC000096014521
PDB chain1ee0 Chain B Residue 700 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1ee0 Structural control of polyketide formation in plant-specific polyketide synthases.
Resolution2.05 Å
Binding residue
(original residue number in PDB)		K60 R63 I64 K67 G168 A169 D212 V215 M259 L261 F270 L272 R274 G310 G311 R312 A313 P380
Binding residue
(residue number reindexed from 1)		K41 R44 I45 K48 G149 A150 D193 V196 M240 L242 F251 L253 R255 G291 G292 R293 A294 P361
Annotation score4
Enzymatic activity
Catalytic site (original residue number in PDB) C169 F220 H308 N341
Catalytic site (residue number reindexed from 1) C150 F201 H289 N322
Enzyme Commision number 2.3.1.-
Gene Ontology
Molecular Function
GO:0016746 acyltransferase activity
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups
Biological Process
GO:0009058 biosynthetic process
GO:0030639 polyketide biosynthetic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:1ee0, PDBe:1ee0, PDBj:1ee0
PDBsum1ee0
PubMed11137815
UniProtP48391|2PS_GERHY 2-pyrone synthase (Gene Name=2PS)

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