Structure of PDB 1d0q Chain B Binding Site BS01

Receptor Information
>1d0q Chain B (length=102) Species: 1422 (Geobacillus stearothermophilus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GHRIPEETIEAIRRGVDIVDVIGEYVQLKRQGRNYFGLCPFHGEKTPSFS
VSPEKQIFHCFGCGAGGNAFTFLMDIEGIPFVEAAKRLAAKAGVDLSVYE
LD
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain1d0q Chain B Residue 151 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB1d0q Structure of the zinc-binding domain of Bacillus stearothermophilus DNA primase.
Resolution1.71 Å
Binding residue
(original residue number in PDB)		C40 H43 C61 C64
Binding residue
(residue number reindexed from 1)		C39 H42 C60 C63
Annotation score1
Enzymatic activity
Enzyme Commision number 2.7.7.101: DNA primase DnaG.
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003896 DNA primase activity
GO:0008270 zinc ion binding
Biological Process
GO:0006260 DNA replication

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Molecular Function
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Biological Process
External links
PDB RCSB:1d0q, PDBe:1d0q, PDBj:1d0q
PDBsum1d0q
PubMed10745010
UniProtQ9X4D0|DNAG_GEOSE DNA primase (Gene Name=dnaG)

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