Structure of PDB 1cn3 Chain B Binding Site BS01

Receptor Information
>1cn3 Chain B (length=283) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MEVLDLVTGPDSVTEIEAFLNPRMGQPPTPESLTEGGQYYGWSRGINLAT
SDTEDSPGNNTLPTWSMAKLQLPMLNEDLTCDTLQMWEAVSVKTEVVGSG
SLLDVHGFNKPTDTVNTKGISTPVEGSQYHVFAVGGEPLDLQGLVTDART
KYKEEGVVTIKTITKKDMVNKDQVLNPISKAKLDKDGMYPVEIWHPDPAK
NENTRYFGNYTGGTTTPPVLQFTNTLTTVLLDENGVGPLCKGEGLYLSCV
DIMGWRVTRNYDVHHWRGLPRYFKITLRKRWVK
Ligand information
>1cn3 Chain F (length=29) Species: 10637 (Mouse polyomavirus (strain Crawford small-plaque)) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
GGGGGGGGAASHQRVTPDWMLPLILGLYG
Receptor-Ligand Complex Structure
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PDB1cn3 Interaction of polyomavirus internal protein VP2 with the major capsid protein VP1 and implications for participation of VP2 in viral entry.
Resolution2.2 Å
Binding residue
(original residue number in PDB)		R238 L264 D265 E266
Binding residue
(residue number reindexed from 1)		R205 L231 D232 E233
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity
Cellular Component
GO:0019028 viral capsid

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Molecular Function
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Cellular Component
External links
PDB RCSB:1cn3, PDBe:1cn3, PDBj:1cn3
PDBsum1cn3
PubMed9628860
UniProtP49302|VP1_POVMP Capsid protein VP1

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