Structure of PDB 1bxh Chain B Binding Site BS01
Receptor Information
>1bxh Chain B (length=237) Species:
3823
(Canavalia ensiformis) [
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ADTIVAVELDTYPNTDIGDPSYPHIGIDIKSVRSKKTAKWNMQNGKVGTA
HIIYNSVDKRLSAVVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLY
KETNTILSWSFTSKLKSNSTHETNALHFMFNQFSKDQKDLILQGDATTGT
DGNLELTRVSSNGSPQGSSVGRALFYAPVHIWESSAVVASFEATFTFLIK
SPDSHPADGIAFFISNIDSSIPSGSTGRLLGLFPDAN
Ligand information
Ligand ID
MMA
InChI
InChI=1S/C7H14O6/c1-12-7-6(11)5(10)4(9)3(2-8)13-7/h3-11H,2H2,1H3/t3-,4-,5+,6+,7+/m1/s1
InChIKey
HOVAGTYPODGVJG-VEIUFWFVSA-N
SMILES
Software
SMILES
CACTVS 3.341
CO[C@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]1O
ACDLabs 10.04
OC1C(O)C(O)C(OC1OC)CO
OpenEye OEToolkits 1.5.0
CO[C@@H]1[C@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O
CACTVS 3.341
CO[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.5.0
COC1C(C(C(C(O1)CO)O)O)O
Formula
C7 H14 O6
Name
methyl alpha-D-mannopyranoside;
O1-METHYL-MANNOSE;
methyl alpha-D-mannoside;
methyl D-mannoside;
methyl mannoside
ChEMBL
CHEMBL195368
DrugBank
DB01979
ZINC
ZINC000004261920
PDB chain
1bxh Chain B Residue 241 [
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Receptor-Ligand Complex Structure
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PDB
1bxh
Man alpha1-2 Man alpha-OMe-concanavalin A complex reveals a balance of forces involved in carbohydrate recognition.
Resolution
2.75 Å
Binding residue
(original residue number in PDB)
Y12 G98 L99 Y100 D208 R228
Binding residue
(residue number reindexed from 1)
Y12 G98 L99 Y100 D208 R228
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0030246
carbohydrate binding
View graph for
Molecular Function
External links
PDB
RCSB:1bxh
,
PDBe:1bxh
,
PDBj:1bxh
PDBsum
1bxh
PubMed
10336986
UniProt
P02866
|CONA_CANEN Concanavalin-A
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