Structure of PDB 1biu Chain B Binding Site BS01
Receptor Information
>1biu Chain B (length=146) Species:
11676
(Human immunodeficiency virus 1) [
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CSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLA
GRWPVKTVHTDNGSNFTSTTVKAACEWGGIKQEFGGVIESMNKELKKIIG
QVRDQAEHLKTAVQMAVFIHNKKRKGGIGGYSAGERIVDIIATDIQ
Ligand information
Ligand ID
MG
InChI
InChI=1S/Mg/q+2
InChIKey
JLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341
[Mg++]
Formula
Mg
Name
MAGNESIUM ION
ChEMBL
DrugBank
DB01378
ZINC
PDB chain
1biu Chain B Residue 1399 [
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Receptor-Ligand Complex Structure
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PDB
1biu
Three new structures of the core domain of HIV-1 integrase: an active site that binds magnesium.
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
D64 D116
Binding residue
(residue number reindexed from 1)
D9 D61
Annotation score
1
Enzymatic activity
Enzyme Commision number
2.7.7.-
2.7.7.49
: RNA-directed DNA polymerase.
2.7.7.7
: DNA-directed DNA polymerase.
3.1.-.-
3.1.13.2
: exoribonuclease H.
3.1.26.13
: retroviral ribonuclease H.
3.4.23.16
: HIV-1 retropepsin.
Gene Ontology
Molecular Function
GO:0003676
nucleic acid binding
Biological Process
GO:0015074
DNA integration
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Molecular Function
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Biological Process
External links
PDB
RCSB:1biu
,
PDBe:1biu
,
PDBj:1biu
PDBsum
1biu
PubMed
9689049
UniProt
P12497
|POL_HV1N5 Gag-Pol polyprotein (Gene Name=gag-pol)
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