Structure of PDB 1avm Chain B Binding Site BS01

Receptor Information
>1avm Chain B (length=201) Species: 1752 (Propionibacterium freudenreichii subsp. shermanii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AVYTLPELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTALDKLAEAR
DKADFGAINKLEKDLAFNLAGHVNHSVFWKNMAPKGSAPERPTDELGAAI
DEFFGSFDNMKAQFTAAATGIQGSGWASLVWDPLGKRINTLQFYDHQNNL
PAGSIPLLQLDMWEHAFYLQYKNVKGDYVKSWWNVVNWDDVALRFSEARV
A
Ligand information
Ligand IDFE
InChIInChI=1S/Fe/q+3
InChIKeyVTLYFUHAOXGGBS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0		[Fe+3]
FormulaFe
NameFE (III) ION
ChEMBL
DrugBankDB13949
ZINC
PDB chain1avm Chain B Residue 202 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB1avm The Structure of the Azide Coordinated Superoxide Dismutase of P. Shermanii Investigated by X-Ray Structure Analysis, Exafs, Mossbauer-and Epr Spectroscopy
Resolution1.55 Å
Binding residue
(original residue number in PDB)		H27 H75 D161 H165
Binding residue
(residue number reindexed from 1)		H27 H75 D161 H165
Annotation score1
Enzymatic activity
Enzyme Commision number 1.15.1.1: superoxide dismutase.
Gene Ontology
Molecular Function
GO:0004784 superoxide dismutase activity
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
Biological Process
GO:0006801 superoxide metabolic process
GO:0019430 removal of superoxide radicals

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Molecular Function
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Biological Process
External links
PDB RCSB:1avm, PDBe:1avm, PDBj:1avm
PDBsum1avm
PubMed
UniProtP80293|SODM_PROFR Superoxide dismutase [Mn/Fe] (Gene Name=sodA)

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