Structure of PDB 1adu Chain B Binding Site BS01

Receptor Information
>1adu Chain B (length=286) Species: 28285 (Human adenovirus 5) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AWEKGMEAARALMDKYHVDNDLKANFKLLPDQVEALAAVCKTWLNEEHRG
LQLTFTSNKTFVTMMGRFLQAYLQSFAEVTYKHHEPTGCALWLHRCAEIE
GELKCLHGSIMINDARCCVHDAFSGKSCGMFFSEGAKAQVAFKQIKAFMQ
ALYPNAQTGHGHLLMPLRCECNSPFLGRQLPKLTPFALSNAEDLDADLIS
DKSVLASVHHPALIVFQCCNPPNCDFKISAPDLLNALVMVRSLWSENFTE
LPRMVVPEFKWSTKHQYRNVSLPVAHSDARQNPFDF
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain1adu Chain B Residue 530 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1adu Alternative arrangements of the protein chain are possible for the adenovirus single-stranded DNA binding protein.
Resolution3.0 Å
Binding residue
(original residue number in PDB)		C284 H286 C339 C355
Binding residue
(residue number reindexed from 1)		C105 H107 C118 C128
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0008270 zinc ion binding
Biological Process
GO:0006260 DNA replication
GO:0006268 DNA unwinding involved in DNA replication
GO:0006351 DNA-templated transcription

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:1adu, PDBe:1adu, PDBj:1adu
PDBsum1adu
PubMed8632448
UniProtP03265|DNB2_ADE05 DNA-binding protein (Gene Name=DBP)

[Back to BioLiP]