Structure of PDB 6z1p Chain Ay Binding Site BS01

Receptor Information
>6z1p Chain Ay (length=190) Species: 312017 (Tetrahymena thermophila SB210) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SQTAAVTNKKGNIIGSQQIPFDRWRIVRGDKVVVISGKDQGKTGTVIRVY
RKTNRVLVEGINVKLKRVAGNAQDESKGSIHKKIHSIHVSKVSLIDPETG
KATRIRFGYLEDGKKIRISTKSGSIIEKPFDHGWKRENRNKNKVDGMLDT
PAEKVLQVTYKGEDFDTIKRDFEKYIQEKERKEKLLVFKD
Ligand information
>6z1p Chain Aa (length=278) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
guaguugauuuuaauacgcacuagauggaugccuagaauuuaaacuucuu
cguaaacaaauuuacgauaucuauuuaguaaauaacauauugauacguuu
auguauuggagauuaauagauaaaguugguaaauaaugaagugaaacauc
auaguaauuauuuaauaaacucaauugagaauaguauaacggugaguaaa
uacuauaaguuuuauuuaaauuaaaauugaaaaauuuggaaaaauuuacc
auagagggugaaagucccguaaauuuac
...............................................<<<
<<<<((....((>>>>....<<<.<<<<..<<<))....)).........
....>>>.....>>>>>>>...>>>......<<<<<<....<<<....>>
>.....>>>>>>........<<....>>..<<<<<<..<<.....>>...
>>>>>>.................<<<<<...<<<<<......>>>>>(..
.....<<<......)>>>...>>>>>..
Receptor-Ligand Complex Structure
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PDB6z1p Ciliate mitoribosome illuminates evolutionary steps of mitochondrial translation.
Resolution3.7 Å
Binding residue
(original residue number in PDB)		S45 Q46 N52 K53 N56 I58 S60 Q61 F65 R67 R69 V71 R72 K82 I91 R92 Y94 R95 K96 T97 L101 E103 S134 K135 R148 R150 Y153 K159 K165 K172 D175 H176 W178 R180 N182 R183 N186
Binding residue
(residue number reindexed from 1)		S1 Q2 N8 K9 N12 I14 S16 Q17 F21 R23 R25 V27 R28 K38 I47 R48 Y50 R51 K52 T53 L57 E59 S90 K91 R104 R106 Y109 K115 K121 K128 D131 H132 W134 R136 N138 R139 N142
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005739 mitochondrion
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6z1p, PDBe:6z1p, PDBj:6z1p
PDBsum6z1p
PubMed32553108
UniProtQ24C34

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