Structure of PDB 6z1p Chain AT Binding Site BS01

Receptor Information

>6z1p Chain AT (length=166) Species: 312017 (Tetrahymena thermophila SB210)

EFKKEIEFLANKPSFTLVDFKQRVIDQLSKLKKGLKAKLLSGQQENEAAL
TKQKTLLNAFTDDELIDPTKIGSTTKKQIAMIAQCEVEDVNKLIHAFKNL
QQAHAFLRRTKEKGQPLPETSEELQWRFRQEKNVSYEYKKTIQSKQYGRS
KVQYRKMQKWSRRLQL

Ligand information

>6z1p Chain Aa (length=278)

guaguugauuuuaauacgcacuagauggaugccuagaauuuaaacuucuu
cguaaacaaauuuacgauaucuauuuaguaaauaacauauugauacguuu
auguauuggagauuaauagauaaaguugguaaauaaugaagugaaacauc
auaguaauuauuuaauaaacucaauugagaauaguauaacggugaguaaa
uacuauaaguuuuauuuaaauuaaaauugaaaaauuuggaaaaauuuacc
auagagggugaaagucccguaaauuuac

...............................................<<<
<<<<((....((>>>>....<<<.<<<<..<<<))....)).........
....>>>.....>>>>>>>...>>>......<<<<<<....<<<....>>
>.....>>>>>>........<<....>>..<<<<<<..<<.....>>...
>>>>>>.................<<<<<...<<<<<......>>>>>(..
.....<<<......)>>>...>>>>>..

Receptor-Ligand Complex Structure

Structure summary

• PDB: 6z1p Ciliate mitoribosome illuminates evolutionary steps of mitochondrial translation.
• Resolution: 3.7 Å
• Binding residue (original residue number in PDB): Q291 K292 W293 S294 L297 Q298
• Binding residue (residue number reindexed from 1): Q158 K159 W160 S161 L164 Q165

Gene Ontology

Molecular Function

• GO:0008312 7S RNA binding

Biological Process

• GO:0006614 SRP-dependent cotranslational protein targeting to membrane

Cellular Component

• GO:0048500 signal recognition particle

External links

• PDB: RCSB:6z1p, PDBe:6z1p, PDBj:6z1p
• PDBsum: 6z1p
• PubMed: 32553108
• UniProt: W7XFS0