Structure of PDB 8apn Chain AL Binding Site BS01
Receptor Information
>8apn Chain AL (length=394) Species:
353565
(Polytomella magna) [
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NTGVPGPRPEVAQKLSTEYQGHILRMISLAESASELDEVLWSSKKHLRPV
HIARSCLKLEYLRTKEKGREVSEPIKNLASELENYVELYSTKFTIGQVSQ
LVRGLSSIRRNIQPDLLLKLAAVVVADDGRQVQLANEMDCRDLFFGFFSQ
GFDNELFWKRLSESVLPRLPYFNADVVSTVLRVVSGLRFLHNTEFAHATM
TALVPKVGDLSPARLADAFFSASLLDPTDVSGLNAKLEERFLREFTSFPI
KDTVTMFQTVTVRRHSTPELAAQVAPLVAAQAHQLPVRHLRRALEGMVTA
GWKDTAEIPLYAILAKQAARLVLTPVQLLRQLARIFANTGLKAGPGANQP
LAPYFAALQRELEGRLAELDEQVTDDFAESFKKVGIAEGARVQI
Ligand information
>8apn Chain A3 (length=207) [
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uuacaggcauuuaauucgaagcauagcgagcuaacguuuagcagguuugc
auaaauuaaauauauuaaaaaagcaagaccgcaaagguuucuguagcaau
agaaucuugugacuuaacguuaggggcgauaaaccaaucacgcuauggca
uagcuaaguuucugcgaaauauauuuagguauagcuuaaaaaacuuuaua
gauaaaa
..............<<.<..<<<<<<<.....<<<<<<.<<..<<<<<<<
.....<<<<.....>>>>....>>>>.>>>...<<<..<<<<........
>>>>.>>>....>>.>>>>>>...<<.......>>......>>>>>>...
>..>.>>............<<<<<....>>>>>.................
.......
Receptor-Ligand Complex Structure
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PDB
8apn
Structure of a mitochondrial ribosome with fragmented rRNA in complex with membrane-targeting elements.
Resolution
3.1 Å
Binding residue
(original residue number in PDB)
S97 T98 E99 Y100 H103 L105 R106 K126 R135 E141 Y142 R184 M219 D220 R222 F226 T260 R263 S266 R295 F301 S302 L305 Q339 T340 V343 R369
Binding residue
(residue number reindexed from 1)
S16 T17 E18 Y19 H22 L24 R25 K45 R54 E60 Y61 R103 M138 D139 R141 F145 T179 R182 S185 R214 F220 S221 L224 Q258 T259 V262 R288
External links
PDB
RCSB:8apn
,
PDBe:8apn
,
PDBj:8apn
PDBsum
8apn
PubMed
36253367
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