Structure of PDB 8cre Chain AI Binding Site BS01 |
|
|
| >8cre Chain 1 (length=3216)
[Search RNA sequence]
[Download ligand structure]
[Download structure with residue number starting from 1]
[View ligand structure]
|
ugaccucaaaucagguaggacuacccgcugaacuuaagcauaucaauaag
cggaggaaaagaaaccaacagggauugccucaguagcggcgagugaagcg
gcaaaagcucaaauuugaaaucuggcgucuuuggcguccgaguuguaauu
ugaagaagguaucuuugggcccggcucuugucuauguuccuuggaacagg
acgucacagagggugagaaucccgugcgaugagaugacccgggucugugu
aaaguuccuucgacgagucgaguuguuugggaaugcagcucuaagugggu
gguaaauuccaucuaaagcuaaauauuggcgagagaccgauagcgaacaa
guacagugauggaaagaugaaaagaacuuugaaaagagagugaaaaagua
cgugaaauuguugaaagggaagggcuugagaucagacuugguauuuugca
ugcgguuuaccgggccagcaucgguuuggagcggcaggauaauggcggag
gaauguggcacggcuucugcuguguguuauagccucugacgauacugcca
gccuagaccgaggacugcgguuuaccuaggauguuggcauaaugaucuua
agucgcccgucuugaaacacggaccaaggagucuaacgucuaugcgagug
uuuggguguaaaacccguacgcguaaugaaagugaacgaaggugggggcc
cauuagggugcaccaucgaccgauccugauguguucggauggauuugagu
aagagcauagcuguugggacccgaaagauggugaacuaugccugaauagg
gugaagccagaggaaacucugguggaggcucguagcgguucugacgugca
aaucgaucgucgaauuuggguauaggggcgaaagacuaaucgaaccaucu
aguagcugguuccugccgaaguuucccucaggauagcagaagcucguauc
aguuuuaugagguaaagcgaaugauuagaagucuugggguugaaaugacc
uuaacuuauucucaaacuuuaaauauguaagaaguccuuguugcuuaauu
gaacguggacaauugaaugaagagcuuuuagugggccauuuuugguaagc
agaacuggcgaugcgggaugaaccgaacgugaaguuaaagugccggaaug
cacgcucaucagacaccacaaaagguguuaguucaucuagacagccggac
gguggccauggaagucggaauccgcuaaggaguguguaacaacucaccgg
ccgaaugaacuagcccugaaaauggauggcgcucaagcgugcuacuuaua
cuucaccgugauugcuguuuugacgcuuucacgaguaggcaggcguggag
gucagugacgaagccuuugcuguaaagcugggucgaacggccucuagugc
agaucuuggugguaguagcaaauauucaaaugagaacuuugaagacugaa
guggggaaagguuccaugucaacagcaguuggacauggguuagucgaucc
uaagagauggggaagcuccguuucaacgugcuugauuuuucaggccaacc
aucgaaagggaauccgguuaaaauuccggaacuuggauauggauucuuca
cggcaacguaacugaauguggagacgucggcgugagcccugggaggaguu
aucuuuucuucuuaacagcuuaucacccuggaauugguuuauccggagau
ggggucuuauggcuggaagagcgcgguaauuuugccgcguccggugcgcu
uacgacgguccuugaaaauccacaggaaggaauaguuuucaugccaaguc
guacucauaaccgcagcaggucuccaagguuaacagccucuaguugauag
aauaauguagauaagggaagucggcaaaauagauccguaacuucgggaua
aggauuggcucuaaggaucgguuuaacgaucaacuuagaacugguacgga
caaggggaaucugacugucuaauuaaaacauagcauugugauggucagaa
agugauguugacacaaugugauuucugcccagugcucugaaugucaaagu
gaagaaauucaaccaagcgcggguaaacggcgggaguaacuaugacucuc
uuaagguagccaaaugccucgucaucuaauuagugacgcgcaugaaugga
uuaacgagauucccacugucccuaucuacuaucuagcgaaaccacagcca
agggaacgggcuuggcagaaucagcggggaaagaagacccuguugagcuu
gacucuaguuugacauugugaaaagacauggaggguguagaauaaguggg
agcuucggcgccggugaaauaccacuaccucuauaguuuuuuuacuuauu
caaugaagcggagcuggaggucaaacuccacguucuagcauuaagcccuc
ugggcgauccggguugaagacauugucagguggggaguuuggcuggggcg
gcacaucuguuaaacgauaacgcagguguccuaagggggacucauggaga
acagaaaucuccaguagaacaaaaggguaaaaguccccuugauuuugauu
uucagugugaauacaaaccaugaaaguguggccuaucgauccuuuagucc
cucggaauuugaggcuagaggugccagaaaaguuaccacagggauaacug
gcuuguggcagucaagcguucauagcgacauugcuuuuugauucuucgau
gucggcucuuccuaucauaccgaagcagaauucgguaagcguuggauugu
ucacccacuaauagggaacgugagcuggguuuagaccgucgugagacagg
uuaguuuuacccuacugaugaauguuaucgcaauaguaauugaacuuagu
acgagaggaaccguucauucagauaauugguuuuugcggcugucugauca
ggcaacgccgcgaagcuaccaucugcuggauuauggcugaacgccucuaa
gucagaauccaugcuagaacgcgaugauuuuugcccugcacauuuuagau
ggauacgaauaagacuuuuuagucgcuggaccauagcaggcuggcaacgg
ugcgcuuagcggaaaggcuuugugcgcuugccggcggauagcaaugucaa
caugcgcggggauaaauccuuugcauacgacuuagauguacaacggagua
uuguaagcaguagaguagccuuguuguuacgaucugcugagauuaagcuc
uuguugucugauuugu |
.......................<<<<<<.....<......>......>>
>>>.>.........<<....>>..<<<<<......<<.....>>.....>
>>>>..[[[...........<<.<<<<<<...>>>>>>.>>.........
....<<<<<...<<<<<<<<<<<<.<<<<<<<<....<<<<......>>>
>.(.......<<<......)>>>..>.>>>>>>>....>>>>>>>>....
>>>>..>>>>>........<<<<<<<........>>>>>>>.....((((
(..<<<<<<)))))..]]]...............................
...<<....>>...............<<<<....>>>>............
......................<<<<<<<<<<<<.....<<<<..<<<<.
.>>>>..>>>>..<<<<<<<.<<<<<<<<.<<<<<<<....<<.<<<<<<
<......<<<<<<......>>>>>>.......>>>>>>.>.>>.>>>>>.
>>>>>>>>>>........<<<..>>>.....>>>>>>>....>>>>>>>>
>>>>..<<<<........>>>><<<<<<....<<<<<<.<<<<<<..<<<
..<<<<<.....>>>>>..>>>...<<....>>.......<<<<<..<<<
<....>>>>...>>>>>.<<<<<<<<<..<<....>>>..>>>.>>>.>>
....>>>>>>.>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<
<....<<<<<<<....>>>>>>>.....>>>...<<<<.<<.<<......
..>>>>>>>>....>>>>>>>>>...<<.......>>......>>>>>>.
..>..>.>>..<<<<<<....<.<<<....>>>.><<<<<<<<<<...<<
<.<<<<<<<.....<<<....<<<....<<<<...<<<<<<.....>>>>
>>.>>>>....>>>..>.>>.....>>>>>...<<<<.<<<<........
.>>>>.>>>>.....>>>>>.>>>>>>>>.>>..<<<<.<<<<<.....>
>>>>.>>>>....<<<......>>>...<<<<<<<..<<<<(((.....<
<<<<<.....<<..........<<<.<<<<<<<<<<.......<<<<<.<
<....<<.........>>....>>.........<<......>>...>>>>
>...>>>>>>>>>>>>>..........))).>>...>>>>>>.>>>>..>
>>>>>><<<<<..<<.........>>..>>>>>....>>>>>><.<<<<<
<<<.<<......<<<<..<<<....>>>.>>>>...>>>>>>>>>>..>.
....>>>>>><<.....<<.....<<<<<<.......>>>>>><<<<...
..<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<
...<<....<<<....>>>..........<<<<<<....>>>>>>.....
.>>....>>...<<<<<........>>>>>))<<<<.<<<<<<<.....<
<<....>>>.......<<<<<<...<<<<.<<<<<<<.<<<<<<<<<<..
{{{..>>>>>><...<<<<<....<<<<<<....<<<.....>>>....>
>>>>>.....>>>>>....><<<<<<<......>>>>>>>>>>>...>>>
>>>>.>>>>.........>>>>>>..........>>>..>>>>>>>>>>>
>..>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<
<.....<<<<<<<.<<...............<<<<<..............
.>>>>><<.<<<<<<<<<<<......>>>>>..>>>>>>.>>........
....<<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<...
..>>>>......>>>>>>>...<<..<<<..<<<<<<....<<<.....<
<<<....>>>>.....>>>.>>>>..>>>>><<<<<<.......>>>>>>
........<...........<<<<<.......>>>>>.....>.....>>
....>>.>>>>>>>.....>>.>>>>>>>..>>>>>>....>>....<<<
<<........>>>>>....[[[[[..{{{.{{......[[[[.{{[[[[.
.<<<<<.<<<<<<<<..<<<<<<<<<<...<.<<................
............................>>.>...>>>>>>>>>>...<<
<<<.....<<<<..<<<<<......>>>>>..............<<<<..
.>>>>..>>>>..>>>>>.....>>>>>>>>..>>>>>...<<<.....>
>>..<<<<<<...........>>>>>>..<<...<<<<<<<...<<<<<<
.......>>>>>>.....<<...(((>>....>>>>>>>...<<<.<<<<
<.......>>>>.>>>>.<<<....>>>.>>))).......((((((..(
(((.>>>>>>))))))))))..........]]]]..}}]]]].......<
<.<...<<<<<<...<<.......>>...>>>>>>....>.>.>......
.<<<<<.<<<<<<..<.<<<<<<<......>>>>>>>...>.<<<.....
....>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>
>>....}}..}}}.]]]]]....<<<<<<<<..<<<<...<<<<<.....
............>>>>>..<<<<<...<<<<....<<<<<<<<<<}}}.>
>>>>..>>>>>...>>>>..>>>>>.<<<<...<<<<<...........>
>>>>...>>>>.>>>>....>>>>>>>>.....<<<<<<.<<<.<.....
<<..........<<<......>>>......>>.......<<<<<<...<<
<<<<<..<<<......>>>..>>>>>>>.>>>>>>..............>
.>>>.>>>>>>..<<<<<<<.............>>....<<<<<<<<<.<
<<....<<<<.<..<<<<<......>>>>>..>>>>>...>>>....>>>
>.>>>>>..>>>>>.. |
|
|
|
|
|
