Structure of PDB 6z1p Chain AF Binding Site BS01

Receptor Information

>6z1p Chain AF (length=115) Species: 312017 (Tetrahymena thermophila SB210)

AFAQFPKMFKTQYKKGRLSSRFRTKSSTWKRGPKTVLKAHKQSNHSALLK
RIRIVGPSWDRKLKFKSANHRHQLRKKSRACLKRKRRARYAHPTDFKRLR
RLIPSLKKASFKNNH

Ligand information

>6z1p Chain Aa (length=278)

guaguugauuuuaauacgcacuagauggaugccuagaauuuaaacuucuu
cguaaacaaauuuacgauaucuauuuaguaaauaacauauugauacguuu
auguauuggagauuaauagauaaaguugguaaauaaugaagugaaacauc
auaguaauuauuuaauaaacucaauugagaauaguauaacggugaguaaa
uacuauaaguuuuauuuaaauuaaaauugaaaaauuuggaaaaauuuacc
auagagggugaaagucccguaaauuuac

...............................................<<<
<<<<((....((>>>>....<<<.<<<<..<<<))....)).........
....>>>.....>>>>>>>...>>>......<<<<<<....<<<....>>
>.....>>>>>>........<<....>>..<<<<<<..<<.....>>...
>>>>>>.................<<<<<...<<<<<......>>>>>(..
.....<<<......)>>>...>>>>>..

Receptor-Ligand Complex Structure

Structure summary

• PDB: 6z1p Ciliate mitoribosome illuminates evolutionary steps of mitochondrial translation.
• Resolution: 3.7 Å
• Binding residue (original residue number in PDB): Q53 P55 K56 T60 Y62 G65 S68 S69 R70 T73 T77 K79 R80 H94 S95 K99 R100 F160 H164
• Binding residue (residue number reindexed from 1): Q4 P6 K7 T11 Y13 G16 S19 S20 R21 T24 T28 K30 R31 H45 S46 K50 R51 F111 H115

Gene Ontology

Molecular Function

• GO:0003735 structural constituent of ribosome

Biological Process

• GO:0006412 translation

Cellular Component

• GO:0005840 ribosome
• GO:1990904 ribonucleoprotein complex

External links

• PDB: RCSB:6z1p, PDBe:6z1p, PDBj:6z1p
• PDBsum: 6z1p
• PubMed: 32553108
• UniProt: I7M803