Structure of PDB 8q7z Chain AE Binding Site BS01

Receptor Information
>8q7z Chain AE (length=99) Species: 9031 (Gallus gallus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVR
DISEASVFDSYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPR
Ligand information
>8q7z Chain A2 (length=1676) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uaccugguugauccugccaguagcauaugcuugucucaaagauuaagcca
ugcaugucuaaguacacacgggcgguacagugaaacugcgaauggcucau
uaaaucaguuaugguuccuuuggucgcuccuacuuggauaacugugguaa
uucuagagcuaauacaugccgacgagcgccgaccuccggggacgcgugca
uuuaucaguggugacucuagauaaccucgagccgaucgcacgcccccgug
gcggcgacgacccauucgaaugucugcccuaucaacuuucgaugguacug
ucugugccuaccauggugaccacggguaacggggaaucaggguucgauuc
cggagagggagccugagaaacggcuaccacauccaaggaaggcagcaggc
gcgcaaauuacccacucccgacccggggagguagugacgaaaaauaacaa
uacaggacucuuucgaggcccuguaauuggaaugaguccacuuuaaaucc
uuuaacgaggauccauuggagggcaagucuggugccagcagccgcgguaa
uuccagcuccaauagcguauauuaaaguugcugcaguuaaaaagcucgua
guuggaucuugggauucccaguuuacuuugaaaaaauuagaguguucaaa
gcaggcuggccgccggaauacuccagcuaggaauaauggaauaggacucc
gguucuauuucggaaacggggccaugauuaagagggacggccgggggcau
ucguauugugccgcuagaggugaaauucuuggaccggcgcaagacgaacu
aaagcgaaagcauuugccaagaauguuuucauuaaucaagaacgaaaguc
ggagguucgaagacgaucagauaccgucguaguuccgaccauaaacgaug
ccgacucgcgauccggcggcguuauucccaugacccgccgggcagcuccc
gggaaacccaagucuuuggguuccggggggaguaugguugcaaagcugaa
acuuaaaggaauugacggaagggcaccaccaggaguggagccugcggcuu
aauuugacucaacacgggaaaccucacccggcccggacacggacaggauu
gacagauugagagcucuuucucgauuccgugggugguggugcauggccgu
ucuuaguugguggagcgauuugucugguuaauuccgauaacgaacgagac
ucuggcaugcuaacuaguuacgcgacccccgagcggucggcguccaacuu
cuuagagggacaaguggcguucagccacccgagauugagcaauaacaggu
cugugaugcccuuagauguccggggcugcacgcgcgcuacacugacuggc
ucagcuugugucuacccuacgccggcaggcgcggguaacccguugaaccc
cauucgugauggggaucggggauugcaauuauuccccaugaacgaggaau
ucccaguaagugcgggucauaagcucgcguugauuaagucccugcccuuu
guacacaccgcccgucgcuacuaccgauuggaugguuuagugagguccuc
ggaucggccccggcggggucggccacggcccugccggagcgucgagaaga
cggucgaacuugacuaucuagaggaaguaaaagucguaacaagguuuccg
uaggugaaccugcggaaggaucauua
...<<<<<.[.((((>>>>><<<.<<<<<<...<.<<..<......<<<.
<<<..<<....<<....<<..........>>...>>.>>......<<...
.....<<<.<<<..<<....<<<<<.........<<.....<<.<<<...
..>>>.>>......>>.........<<<<...<<<..>>>...>>>><<.
.<<<<<...<......>..>>>>>......>>...<<<<.<<<<.....>
>>>>>>>.>>.>>>...>>>>>.>>>.<<<....<<<....<<<<<<...
........>>>>>>>>>......>>>...<<<.<<<<....>>>>....>
>>.>>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>
.........<<<....<<<<...>>>>..>>>..>...>>.>.....<<<
<<<<<<.<<<....>>>..>>>>>>.>>>......<<..<..........
.>..>>.........<<<<<((......<<<<.....<<..))>>.....
..>>>>.>>>>>..>>>>>>.>>>.........<.<((.....<.<<...
<<<.<<...<.<<....>>>..<<<<<<.<.......<<...<.......
>..<<<.....>>>....>>......>.>>>..>>>........<.<<<<
<.<<<<.....>>>>.>>>>>.>....>>....<<<<<<..<...<<<<.
.<<..<<<<<<<<...<<<......>>>......>>>>>>>>..>>....
...<<....>>...>>>>..>..>>>.>>>...>>>...>>.>....<<<
<<<<...<...<<<<.<.....>.>>>>...>>>>>>>>..........<
<<.<<..<<..<<<<<<<<.<<<<<....>>>>>>>>>>>>>..>>....
<<..))>>...>>.....>>>.>.>.<<<......<<<<....>>>>...
.>>>..)))).]<<<<<.<<<<<<<..<<..<<<<<..<<<.<<<<<<..
....<<........>>..........<<<<<.<....<<<<<<.......
<<.<<<........>>>.>>.....>>>>>>...<<.<<<..<<.<<<<<
<....<<<.<<<<<....>>>...<<<......>>>...>>.>>>....<
<<...<...<<<<..<<<<<<<<<<<<.......>>>>.>>>>..>>>>.
.>>>>..>.....<<<<<.....>>>>>........>>>....>>>.>>>
.....>>>>>>>.....>.>>>>>...>>.>>>>.>>>.....<<.<<<.
.......<.......<<<.<<<<....>>>>.>>>....>.........>
>>.>>......<.....<<<<<..........>>>>>.....>.....>>
>>>.....<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>
>>.>>....<..<<.<..<<<<.<<....<<<<<<<<.<<<..<<<<.<<
...<<<<<.<<<<<<..<<<<....>>>>..>>>>>>...>>>>>...>>
.>>>>..>>>.>>>>>>>>...>>.>>>>...>.>>...>.....<<<<<
<<<<<..>>>>>>>>>>.........
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8q7z Structural insights into inactive ribosome complexes derived from cold-treated chick embryo cells
Resolution2.5 Å
Binding residue
(original residue number in PDB)
T2 K3 K4 R5 R6 N7 N8 G9 R10 K13 G14 R15 G16 H17 R28 K32 K34 K37 K38 F39 Y68 K70 V75 S76 I79 H80 K82 V83 V84 R85 N86 R87 S88 R89 R92 K93 R95 P97 P98 R100
Binding residue
(residue number reindexed from 1)
T1 K2 K3 R4 R5 N6 N7 G8 R9 K12 G13 R14 G15 H16 R27 K31 K33 K36 K37 F38 Y67 K69 V74 S75 I78 H79 K81 V82 V83 R84 N85 R86 S87 R88 R91 K92 R94 P96 P97 R99
External links