Structure of PDB 8jdj Chain AE Binding Site BS01

Receptor Information
>8jdj Chain AE (length=144) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADIDLTK
RAGELTEDEVERVITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLD
NKLREDLERLKKIRAHRGLRHFWGLRVRGQHTKTTGRRGRTVGV
Ligand information
>8jdj Chain B (length=75) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uccucguuaguauaguggugaguauccccgccugucacgcgggagaccgg
gguucgauuccccgacggggagcca
<<<<<<<..<<<<........>>>><<<<<<.......>>>>>.>..<<<
<<.......>>>>>>>>>>>>....
Receptor-Ligand Complex Structure
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PDB8jdj Glycosylated queuosines in tRNAs optimize translational rate and post-embryonic growth.
Resolution2.5 Å
Binding residue
(original residue number in PDB)		V146 G147
Binding residue
(residue number reindexed from 1)		V142 G143
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0019843 rRNA binding
Biological Process
GO:0002181 cytoplasmic translation
GO:0006412 translation
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0005925 focal adhesion
GO:0014069 postsynaptic density
GO:0015935 small ribosomal subunit
GO:0016020 membrane
GO:0022626 cytosolic ribosome
GO:0022627 cytosolic small ribosomal subunit
GO:0045202 synapse
GO:0070062 extracellular exosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8jdj, PDBe:8jdj, PDBj:8jdj
PDBsum8jdj
PubMed37992713
UniProtP62269|RS18_HUMAN Small ribosomal subunit protein uS13 (Gene Name=RPS18)

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