Structure of PDB 6vmi Chain AD Binding Site BS01 |
|
>6vmi Chain AA (length=944)
[Search RNA sequence]
[Download ligand structure]
[Download structure with residue number starting from 1]
[View ligand structure]
|
auagguuugguccuagccuuucuauuagcucuuaguaagauuacacaugc aagcauccccguuccagugaguucacccucuaaaucaccacgaucaaaag gaacaagcaucaagcacgcagcaaugcagcucaaaacgcuuagccuagcc acacccccacgggaaacagcagugauuaaccuuuagcaauaaacgaaagu uuaacuaagcuauacuaaccccaggguuggucaauuucgugccagccacc gcggucacacgauuaacccaagucaauagaagccggcguaaagaguguuu uagaucacccccaauaaagcuaaaacucaccugaguuguaaaaaacucca guugacacaaaauagacuacgaaaguggcuuuaacauaucugaacacaca auagcuaagacccaaacugggauuagauaccccacuaugcuuagcccuaa accucaacaguuaaaucaacaaaacugcucgccagaacacuacgagccac agcuuaaaacucaaaggaccuggcggugcuucauaucccucuagaggagc cuguucuguaaucgauaaaccccgaucaaccucaccaccucuugcucagc cuauauaccgccaucuucagcaaacccugaugaaggcuacaaaguaagcg caaguacccacguaaagacguuaggucaagguguagcccaugagguggca agaaaugggcuacauuuucuaccccagaaacgauagcccuuaugaaacuu aagggucgaagguggauuuagcaguaaacuaagaguagagugcuuaguug aacagggcccugaagcgcguacacaccgcccgucacccuccucaaguaua cuucaaaggacauuuaacuaaaaccccuacgcauuuauauagaggagaca agucguaacaugguaaguguacuggaaagugcacuuggacgaac |
..((((..<<<<<..)))).<<<<<<.<...<<<<<<<<..<.<<<.<<< ................<<........<<<.<..<<<.....>>>.>..>> >...<<<<....<<<..<<<....>>>.>>>......>>>>.<<...>>. >>.<<<....>>>.....>>>>>>>........<<<....<<<<....>> >>..>>>..>>.>>>>>>.....<<<<<<<<.....(((.....((.>>> )).......)))..>>>>>...>.>>>>>>....<<<((.....<<<<.. <<<<..........<<<<<<......<<<.<<<.<<<......>>>..>> >.>>>.............<<....>>.>>>>>>.....>>>>...>>>>. ...<<<<<<...<<...<<<<.........>>>>...>>>>>>>>..... .....<.<<<<<......))..>>>>>.>.>>>.<<.......<<<<... .>>>>.....>>...>>>>><<<<<.<<<<<<<...<<<.<<<<<..<<< <<<<<<<.....<<........>>..........<<<<<<<.......<< .<<<..<<<<<<<......<<....<<<.....>>>...........>>. ....<<<....>>>.......>.>>>...>>>>>>>>....>>>>>>>.. >>.>>>>>>>>.....<<<<.....>>>>......<<<<<<......... >>>>>>..........>>>>>.....<<<<<<<.........>>>>>>>. ....>>>...>>>>>>>>>>.>>.......<<.<...<<<<<<..<<<<< .............<.......>.............>>>>>.>>>>>>... .>.>>.........<<<<<<<<<....>>>>>>>>>........ |
|
Global view | Local view | Structure summary |
[Spin on]
[Spin off]
[Reset]
[High quality]
[Low quality]
[White background]
[Black background]
|
[Spin on]
[Spin off]
[Reset]
[High quality]
[Low quality]
[White background]
[Black background]
|
PDB | 6vmi Structures of the human mitochondrial ribosome bound to EF-G1 reveal distinct features of mitochondrial translation elongation. |
Resolution | 2.96 Å |
Binding residue (original residue number in PDB) | T91 E97 K100 G101 A104 T106 K111 K112 R114 K119 S194 G195 R226 V228 F229 T230 M231 T232 A233 K234 R237 R242 F256 K260 K270 R297 K299 R315 C316 H317 R318 K335 G338 S339 L343 Q347 R351 W408 K418 R419 V421 W422 |
Binding residue (residue number reindexed from 1) | T4 E10 K13 G14 A17 T19 K24 K25 R27 K32 S107 G108 R139 V141 F142 T143 M144 T145 A146 K147 R150 R155 F169 K173 K183 R210 K212 R228 C229 H230 R231 K248 G251 S252 L256 Q260 R264 W321 K331 R332 V334 W335 |
|
|
Enzyme Commision number |
? |
|
|
|