Structure of PDB 8bqs Chain AB Binding Site BS01

Receptor Information
>8bqs Chain AB (length=688) Species: 312017 (Tetrahymena thermophila SB210) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KQIEIFIDGKPAKVDDSYTIFQACYENGVIVPRFCYHERLSVAGNCRMCL
VEVENVPKPVAACASQVVPGMKIKTKSEKTRIHRGNVMEFLLANHPLDCP
ICDQGGECDLQDISSVYGYGISRYNEYKRAVEDKNYGPLVATSMNRCIHC
TRCVRFATQIAGVEDLGKTGRGKAAEIGTYVEKTFNTELSGNVVDVCPVG
ALTNAPYAFTSRPWELKSFYTSDVFDTLGSAIQVDTRGPEIMRVLPRIHE
EINEEWISDKTRHAFDGLKRQRINSPMKRSKDGNYEDIFWEEAIQTISKK
CLNTPSDQIGAIIGEFADIESITALKDFLNRLDVDNFEVRQHGNLKVSPD
FRANYLMNSKITGVEDADVLLLVGCNPRYEAPVLNARILKSTRKNLKVFN
IGTNQDLNYKNVHLGNSTKVLKEIADGTHPFAERLKKAKLPMIMVGASAL
EREDGAELYNTLKVISNKTGVISEEKSWNGFNILHKEMGRINALELGINP
TSVNKNAKLVFILGADNNLRPEDIPADAFVVYFGTHGDEGAYYADIILPT
AAYTEKNATWVNTEGRVQQGRLVVMPPGDAREDWQIIRALSEEAGVPLPY
DSLEELRYRVAELAPHLLKYDYIEPTIFGKVALSAQQGVKTTLSPTPITD
YIDNFYMTDAISRASVTMAKCSTAFNHEKFSNFKNLAK
Ligand information
Ligand IDFES
InChIInChI=1S/2Fe.2S
InChIKeyNIXDOXVAJZFRNF-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04[Fe]1S[Fe]S1
CACTVS 3.341
OpenEye OEToolkits 1.5.0
S1[Fe]S[Fe]1
FormulaFe2 S2
NameFE2/S2 (INORGANIC) CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain8bqs Chain AB Residue 801 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8bqs Structural basis of mitochondrial membrane bending by I-II-III2-IV2 supercomplex
Resolution2.9 Å
Binding residue
(original residue number in PDB)
R63 C65 Y66 G74 C76 R77 C79 C93
Binding residue
(residue number reindexed from 1)
R33 C35 Y36 G44 C46 R47 C49 C63
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003954 NADH dehydrogenase activity
GO:0008137 NADH dehydrogenase (ubiquinone) activity
GO:0016491 oxidoreductase activity
GO:0016651 oxidoreductase activity, acting on NAD(P)H
GO:0046872 metal ion binding
GO:0051536 iron-sulfur cluster binding
GO:0051539 4 iron, 4 sulfur cluster binding
Biological Process
GO:0042773 ATP synthesis coupled electron transport
GO:0045333 cellular respiration
GO:1902600 proton transmembrane transport
Cellular Component
GO:0016020 membrane

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:8bqs, PDBe:8bqs, PDBj:8bqs
PDBsum8bqs
PubMed
UniProtQ23KA9

[Back to BioLiP]