Structure of PDB 7yzs Chain AAA Binding Site BS01

Receptor Information
>7yzs Chain AAA (length=384) Species: 358 (Agrobacterium tumefaciens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AELKIFVSSQHQPDIWRKALDQYEAKTPGVKVVIETGGNTSEMQAQYLNT
VMSAKDSSLDVLMLDVIRPAQFATAGWTSDFSGKDLSAYLPTYAEANTVN
GKIVALPAFADSMFLYYRKDLLDKYGIKPPTTWDELKEASKKVMEGEKNP
ELQGLSFQGKAIEGAVCTFLLPYWSEGKSLVENGKLNFDNKAAVDSLKLW
KSFVDDGISKKNISEVATDDTRKEFQAGKVLFAVNWSYAWTHFQGKESQV
NDKVGVARLPAVKGGEQTTCLGGWEFGVSAYSKQQDEAKKLVEYLSSQDV
SKFMAINAALLPTYAALYKDADVTKTIPWFADALPVVETAKARPVTPRYN
EVSETIRTTVNGVLAGVMTPEDGAKQMESRLRRV
Ligand information
Ligand IDYZT
InChIInChI=1S/C6H12O8S/c7-3-2(1-15(11,12)13)14-6(10)5(9)4(3)8/h2-10H,1H2,(H,11,12,13)/t2-,3-,4+,5-,6-/m1/s1
InChIKeyQFBWOLBPVQLZEH-VFUOTHLCSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.6C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)S(=O)(=O)O
OpenEye OEToolkits 1.7.6C(C1C(C(C(C(O1)O)O)O)O)S(=O)(=O)O
ACDLabs 12.01O=S(=O)(O)CC1OC(O)C(O)C(O)C1O
CACTVS 3.370O[CH]1O[CH](C[S](O)(=O)=O)[CH](O)[CH](O)[CH]1O
CACTVS 3.370O[C@@H]1O[C@H](C[S](O)(=O)=O)[C@@H](O)[C@H](O)[C@H]1O
FormulaC6 H12 O8 S
Name6-deoxy-6-sulfo-beta-D-glucopyranose
ChEMBL
DrugBank
ZINC
PDB chain7yzs Chain AAA Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7yzs The sulfoquinovosyl glycerol binding protein SmoF binds and accommodates plant sulfolipids.
Resolution1.8 Å
Binding residue
(original residue number in PDB)		H13 T42 S43 D67 D113 E165 G166 T220 W238 G274 G275 W276 R345
Binding residue
(residue number reindexed from 1)		H11 T40 S41 D65 D111 E163 G164 T218 W236 G272 G273 W274 R343
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:1901982 maltose binding
Biological Process
GO:0015768 maltose transport
GO:0042956 maltodextrin transmembrane transport
Cellular Component
GO:0042597 periplasmic space
GO:0055052 ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7yzs, PDBe:7yzs, PDBj:7yzs
PDBsum7yzs
PubMed35341160
UniProtA9CEY9|SMOF_AGRFC Sulfoquinovosyl glycerol-binding protein SmoF (Gene Name=smoF)

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