Structure of PDB 7n7x Chain AAA Binding Site BS01

Receptor Information
>7n7x Chain AAA (length=229) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IVGGTESSWGEWPWQVSLQVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLP
LQDVWRIYSGILELSDITKDTPFSQIKEIIIHQNYKVSEGNHDIALIKLQ
APLEYTEFQKPISLPIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEE
CQKRYQDYKITQRMVCAGYKEGGKDACKGDSGGPLVCKHNGMWRLVGITS
WGEGCARREQPGVYTKVAEYMDWILEKTQ
Ligand information
Ligand ID0RI
InChIInChI=1S/C30H26F4N6O/c31-24-10-9-22(28(37-17-18-7-8-18)21-5-1-3-19(11-21)15-35)13-25(24)38-29(41)26-14-27(30(32,33)34)39-40(26)23-6-2-4-20(12-23)16-36/h1-6,9-14,18,28,37H,7-8,16-17,36H2,(H,38,41)/t28-/m1/s1
InChIKeyUXNXMBYCBRBRFD-MUUNZHRXSA-N
SMILES
SoftwareSMILES
CACTVS 3.385NCc1cccc(c1)n2nc(cc2C(=O)Nc3cc(ccc3F)[C@H](NCC4CC4)c5cccc(c5)C#N)C(F)(F)F
ACDLabs 12.01N#Cc1cccc(c1)C(NCC1CC1)c1cc(NC(=O)c2cc(nn2c2cccc(CN)c2)C(F)(F)F)c(F)cc1
OpenEye OEToolkits 2.0.7c1cc(cc(c1)n2c(cc(n2)C(F)(F)F)C(=O)Nc3cc(ccc3F)[C@@H](c4cccc(c4)C#N)NCC5CC5)CN
CACTVS 3.385NCc1cccc(c1)n2nc(cc2C(=O)Nc3cc(ccc3F)[CH](NCC4CC4)c5cccc(c5)C#N)C(F)(F)F
OpenEye OEToolkits 2.0.7c1cc(cc(c1)n2c(cc(n2)C(F)(F)F)C(=O)Nc3cc(ccc3F)C(c4cccc(c4)C#N)NCC5CC5)CN
FormulaC30 H26 F4 N6 O
NameOrladeyo;
1-[3-(aminomethyl)phenyl]-N-(5-{(R)-[3-(aminomethyl)phenyl][(cyclopropylmethyl)amino]methyl}-2-fluorophenyl)-3-(trifluoromethyl)-1H-pyrazole-5-carboxamide
ChEMBLCHEMBL5189739
DrugBankDB15982
ZINC
PDB chain7n7x Chain AAA Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB7n7x Berotralstat (BCX7353): Structure-Guided Design of a Potent, Selective, and Oral Plasma Kallikrein Inhibitor to Prevent Attacks of Hereditary Angioedema (HAE).
Resolution2.097 Å
Binding residue
(original residue number in PDB)
H44 G90 D93 Y242 D259 A260 C261 K262 S284 W285 G286 E287 G288 C289
Binding residue
(residue number reindexed from 1)
H44 G90 D93 Y158 D175 A176 C177 K178 S200 W201 G202 E203 G204 C205
Annotation score1
Binding affinityBindingDB: Ki=25.1nM
Enzymatic activity
Enzyme Commision number 3.4.21.34: plasma kallikrein.
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function

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Biological Process
External links
PDB RCSB:7n7x, PDBe:7n7x, PDBj:7n7x
PDBsum7n7x
PubMed34436898
UniProtP03952|KLKB1_HUMAN Plasma kallikrein (Gene Name=KLKB1)

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