Structure of PDB 6zq0 Chain AAA Binding Site BS01

Receptor Information
>6zq0 Chain AAA (length=627) Species: 40446 (Meripilus giganteus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VTVTVNKNPSHTVPSTLYGLMFEDINHSGDGGLYAELLQNRAFQQVTPNT
AAALAAWHPISNAKLAVIQDPSPVSNALPNSLQFSVPSGSSGRVGFTNEG
FWGIKVDSTWTYKASLFFRFPTSSSFSGALTVGLQTNAGRVLAQNSTQIR
GTTTKWTQINLELHPTASAPDVSNSFFVTIDGAAGAGQTINFAMFSLFPP
TFKNRPNGLRADIAETLAEMGPSFFRFPGGNNLEGQTTATRWQWNATVGS
LLDRPGRVGDWGYVNTDGLGLLEYLQFFEDTGMEPIMAVWAGYSLGGTSL
AENQLAPYIQQAIDQINFVIGDPAKSAPAALRASLGHPEPFTLRFVEVGN
EDFFAAGSYPYRWHDFVTALQAQFPQIRFIATTNAWNPVLSPVPQSYDVH
VYQTPTWFYQNAFYYDGFQRNGTTYFEGEYAAISTNANDLFGTVADGRLA
FPTVQSATGEAAFMTGLERNSDIVFAASYAPLLQHVNSTQWTPDLVSYDA
GSVIKSTSFFAQKLFALNKGDQYLPSTLPTNGGTLHWSITRASSSGKTFI
KIANAGSSAQSLTFQLTQFNSVSSTGTLQVLTGPETASNTPEAPQAIVPK
TSTIGTGKTFTYNAPAFSVSVITVTTN
Ligand information
Ligand IDLXE
InChIInChI=1S/C6H13NO3/c7-4-1-5(9)6(10)3(4)2-8/h3-6,8-10H,1-2,7H2/p+1/t3-,4+,5+,6+/m1/s1
InChIKeyXJKPQBOZNVQXOP-VANKVMQKSA-O
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7C1C(C(C(C1O)O)CO)[NH3+]
CACTVS 3.385[NH3+][CH]1C[CH](O)[CH](O)[CH]1CO
OpenEye OEToolkits 2.0.7C1[C@@H]([C@H]([C@@H]([C@H]1O)O)CO)[NH3+]
CACTVS 3.385[NH3+][C@H]1C[C@H](O)[C@@H](O)[C@@H]1CO
FormulaC6 H14 N O3
Name[(1~{S},2~{S},3~{S},4~{S})-2-(hydroxymethyl)-3,4-bis(oxidanyl)cyclopentyl]azanium
ChEMBL
DrugBank
ZINC
PDB chain6zq0 Chain AAA Residue 711 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6zq0 Structure of a GH51 alpha-L-arabinofuranosidase from Meripilus giganteus: conserved substrate recognition from bacteria to fungi.
Resolution1.54 Å
Binding residue
(original residue number in PDB)		E23 N231 N350 E351 Y402 E429 W491
Binding residue
(residue number reindexed from 1)		E23 N231 N350 E351 Y402 E429 W491
Annotation score1
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sat Nov 16 09:37:31 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '6zq0', asym_id = 'AAA', bs = 'BS01', title = 'Structure of a GH51 alpha-L-arabinofuranosidase ...ved substrate recognition from bacteria to fungi.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='6zq0', asym_id='AAA', bs='BS01', title='Structure of a GH51 alpha-L-arabinofuranosidase ...ved substrate recognition from bacteria to fungi.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0046373,0046556', uniprot = '', pdbid = '6zq0', asym_id = 'AAA'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0046373,0046556', uniprot='', pdbid='6zq0', asym_id='AAA')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>