Structure of PDB 6ola Chain A8 Binding Site BS01

Receptor Information
>6ola Chain A8 (length=196) Species: 85708 (Porcine circovirus 2) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
YRWRRKNGIFNTRLSRTIGYTVKKTTVRTPSWNVDMMRFNINDFLPPGGG
SNPLTVPFEYYRIRKVKVEFWPCSPITQGDRGVGSTAVILDDNFVTKANA
LTYDPYVNYSSRHTITQPFSYHSRYFTPKPVLDRTIDYFQPNNKRNQLWL
RLQTTGNVDHVGLGTAFENSIYDQDYNIRITMYVQFREFNLKDPPL
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6ola Structural characterization of the PCV2d virus-like particle at 3.3 angstrom resolution reveals differences to PCV2a and PCV2b capsids, a tetranucleotide, and an N-terminus near the icosahedral 3-fold axes.
Resolution3.3 Å
Binding residue
(original residue number in PDB)
R48 K102 W106 Y156 Y160 Y218
Binding residue
(residue number reindexed from 1)
R13 K67 W71 Y121 Y125 Y183
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0019069 viral capsid assembly

View graph for
Biological Process
External links
PDB RCSB:6ola, PDBe:6ola, PDBj:6ola
PDBsum6ola
PubMed31505320
UniProtG0ZPI6

[Back to BioLiP]