Structure of PDB 9iul Chain A Binding Site BS01

Receptor Information
>9iul Chain A (length=1335) Species: 237561 (Candida albicans SC5314) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EYHGFDAHTSENIQNLARTFTHDSFKNDQLNPDSENFNAKFWVKNLRKLF
ESDPEYYKPSKLGIGYRNLRAYGVPTVTNALWKLATEGFRHFQRYFDILK
SMDAIMRPGELTVVLGRPGAGCSTLLKTIAVNTYGFHIGKESQITYDGLS
PHDIERHYRGDVIYSAETDVHFPHLSVGDTLEFAARLRTPQNRGEGIDRE
TYAKHMASVYMATYGLSHTRNTNVGNDFVRGVSGGERKRVSIAEASLSGA
NIQCWDNATRGLDSATALEFIRALKTSAVILDTTPLIAIYQCSQDAYDLF
DKVVVLYEGYQIFFGKATKAKEYFEKMGWKCPQRQTTADFLTSLTNPAER
EPLPGYEDKVPRTAQEFETYWKNSPEYAELTKEIDEYFVECERSPASPYT
VSFFMQVRYGVARNFLRMKGDPSIPIFSVFGQLVMGLILSSVFYNLSQTT
GSFYYRGAAMFFAVLFNAFSSLLEIMSLFEARPIVEKHKKYALYRPSADA
LASIISELPVKLAMSMSFNFVFYFMVNFRRNPGRFFFYWLMCIWCTFVMS
HLFRSIGAVSTSISGAMTPATVLLLAMVIYTGFVIPTPSMLGWSRWINYI
NPVGYVFESLMVNEFHGREFQCAQYVPSGPGYENISRSNQVCTAVGSVPG
NEMVSGTNYLAGAYQYYNSHKWRNLGITIGFAVFFLAIYIALTEFNKGNR
EIFFWRDLTYQVKIKKEDRVILDHVDGWVKPGQITALMGASGAGKTTLLN
CLSERVTTGIITDGERLVNGHALDSSFQRSIGYVQQQDVHLETTTVREAL
QFSAYLRQSNKISKKEKDDYVDYVIDLLEMTDYADALVGVAGEGLNVEQR
KRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILC
TIHQPSALIMAEFDRLLFLQKGGRTAYFGELGENCQTMINYFEKYGADPC
PKEANPAEWMLQVVGAAPGSHAKQDYFEVWRNSSEYQAVREEINRMEAEL
SKLPRDNDPEALLKYAAPLWKQYLLVSWRTIVQDWRSPGYIYSKIFLVVS
AALFNGFSFFKAKNNMQGLQNQMFSVFMFFIPFNTLVQQMLPYFVKQRDV
YEVREAPSRTFSWFAFIAGQITSEIPYQVAVGTIAFFCWYYPLGLYNNAT
PTDSVNPRGVLMWMLVTAFYVYTATMGQLCMSFSELADNAANLATLLFTM
CLNFCGVLAGPDVLPGFWIFMYRCNPFTYLVQAMLSTGLANTFVKCAERE
YVSVKPPNGESCSTYLDPYIKFAGGYFETRNDGSCAFCQMSSTNTFLKSV
NSLYSERWRNFGIFIAFIAINIILTVIFYWLARVP
Ligand information
Ligand IDA1L26
InChIInChI=1S/C47H85O19P3/c1-3-5-7-9-11-13-15-17-19-20-22-23-25-27-29-31-33-35-40(48)61-37-39(63-41(49)36-34-32-30-28-26-24-21-18-16-14-12-10-8-6-4-2)38-62-69(59,60)66-45-42(50)43(51)46(64-67(53,54)55)47(44(45)52)65-68(56,57)58/h11,13,17,19,22-23,27,29,39,42-47,50-52H,3-10,12,14-16,18,20-21,24-26,28,30-38H2,1-2H3,(H,59,60)(H2,53,54,55)(H2,56,57,58)/b13-11+,19-17+,23-22+,29-27+/t39-,42-,43+,44-,45+,46+,47+/m1/s1
InChIKeyWSOUXFSBLZNSFX-BSWMUMJKSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7CCCCCCCCCCCCCCCCCC(=O)OC(COC(=O)CCCC=CCC=CCC=CCC=CCCCCC)COP(=O)(O)OC1C(C(C(C(C1O)OP(=O)(O)O)OP(=O)(O)O)O)O
OpenEye OEToolkits 2.0.7CCCCCCCCCCCCCCCCCC(=O)O[C@H](COC(=O)CCC/C=C/C/C=C/C/C=C/C/C=C/CCCCC)COP(=O)(O)O[C@H]1[C@@H]([C@@H]([C@@H]([C@H]([C@@H]1O)OP(=O)(O)O)OP(=O)(O)O)O)O
CACTVS 3.385CCCCCCCCCCCCCCCCCC(=O)O[CH](COC(=O)CCCC=CCC=CCC=CCC=CCCCCC)CO[P](O)(=O)O[CH]1[CH](O)[CH](O)[CH](O[P](O)(O)=O)[CH](O[P](O)(O)=O)[CH]1O
CACTVS 3.385CCCCCCCCCCCCCCCCCC(=O)O[C@H](COC(=O)CCC/C=C/C/C=C/C/C=C/C/C=C/CCCCC)CO[P](O)(=O)O[C@H]1[C@H](O)[C@H](O)[C@H](O[P](O)(O)=O)[C@@H](O[P](O)(O)=O)[C@@H]1O
FormulaC47 H85 O19 P3
NamePip2(20:4/18:0);
[(2R)-3-[hydroxy-[(1S,5S)-2,3,6-trihydroxy-4,5-diphosphonooxycyclohexyl]oxyphosphoryl]oxy-2-octadecanoyloxypropyl] (5Z,8Z,11Z,14Z)-icosa-5,8,11,14-tetraenoate;
Phosphatidylinositol Diphosphate(20:4n6/18:0)
ChEMBL
DrugBank
ZINC
PDB chain9iul Chain A Residue 1601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB9iul Cryo-EM structures of Candida albicans Cdr1 reveal azole-substrate recognition and inhibitor blocking mechanisms.
Resolution3.3 Å
Binding residue
(original residue number in PDB)
G623 R624 I633 F637 N758 K761 W762
Binding residue
(residue number reindexed from 1)
G533 R534 I543 F547 N668 K671 W672
Annotation score1
External links
PDB RCSB:9iul, PDBe:9iul, PDBj:9iul
PDBsum9iul
PubMed39242571
UniProtQ5ANA3|CDR1_CANAL Pleiotropic ABC efflux transporter of multiple drugs CDR1 (Gene Name=CDR1)

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