Structure of PDB 9fij Chain A Binding Site BS01
Receptor Information
>9fij Chain A (length=155) Species:
224324
(Aquifex aeolicus VF5) [
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FEFPEELKTKLQEHINYFPKKRQAILLCLHEIQNYYGYIPPESLKPLADM
LELPLNHVEGVVAFYDMFDREDKAKYRIRVCVSIVCHLMGTNKLLKALEN
ILGIKPGEVTPDGKFKIVPVQCLGACSEAPVFMVNDDEYKFESEVQLNEI
LSRYT
Ligand information
Ligand ID
FES
InChI
InChI=1S/2Fe.2S
InChIKey
NIXDOXVAJZFRNF-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
[Fe]1S[Fe]S1
CACTVS 3.341
OpenEye OEToolkits 1.5.0
S1[Fe]S[Fe]1
Formula
Fe2 S2
Name
FE2/S2 (INORGANIC) CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain
9fij Chain A Residue 201 [
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Receptor-Ligand Complex Structure
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PDB
9fij
Structural robustness of the NADH binding site in NADH:ubiquinone oxidoreductase (complex I).
Resolution
2.35 Å
Binding residue
(original residue number in PDB)
C86 V90 C91 C127 L128 C131
Binding residue
(residue number reindexed from 1)
C81 V85 C86 C122 L123 C126
Annotation score
1
Gene Ontology
Molecular Function
GO:0003954
NADH dehydrogenase activity
GO:0046872
metal ion binding
GO:0048038
quinone binding
GO:0051537
2 iron, 2 sulfur cluster binding
Cellular Component
GO:0045271
respiratory chain complex I
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Molecular Function
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Cellular Component
External links
PDB
RCSB:9fij
,
PDBe:9fij
,
PDBj:9fij
PDBsum
9fij
PubMed
38960077
UniProt
O66842
|NUOE_AQUAE NADH-quinone oxidoreductase subunit E (Gene Name=nuoE)
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