Structure of PDB 9feh Chain A Binding Site BS01

Receptor Information
>9feh Chain A (length=264) Species: 9606,2697049 [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RLPAHLRLQPIYWSRDDVAQWLKWAENEFSLRPIDSNTFEMNGKALLLLT
KEDFRYRSPHSGDELYELLQHILKQPAAGDELKINAACRKVQHMVVKAAL
LADKFPVLHDIGNPKAIKCVPQADVEWKFYDAQPCSDKAYKIEELFYSYA
THSDKFTDGVCLFWNCNVDRYPANSIVCRFKSAFVNLKQLPFFYYSDSPC
ESHDYVPLKSATCITRCNLGGAVCRHHANEYRLYLDAYNMMISAGFSLWV
YKQFDTYNLWNTFT
Ligand information
Ligand IDA1IB6
InChIInChI=1S/C28H27N7O6S/c1-3-34(42(38,39)20-8-9-21(40-2)19(11-20)12-29)15-22-24(36)25(37)28(41-22)35-14-18(7-6-17-5-4-10-31-13-17)23-26(30)32-16-33-27(23)35/h4-5,8-11,13-14,16,22,24-25,28,36-37H,3,15H2,1-2H3,(H2,30,32,33)
InChIKeyCNRYAFNRBRLDCL-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7CCN(C[C@@H]1[C@H]([C@H]([C@@H](O1)n2cc(c3c2ncnc3N)C#Cc4cccnc4)O)O)S(=O)(=O)c5ccc(c(c5)C#N)OC
CACTVS 3.385CCN(C[CH]1O[CH]([CH](O)[CH]1O)n2cc(C#Cc3cccnc3)c4c(N)ncnc24)[S](=O)(=O)c5ccc(OC)c(c5)C#N
CACTVS 3.385CCN(C[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cc(C#Cc3cccnc3)c4c(N)ncnc24)[S](=O)(=O)c5ccc(OC)c(c5)C#N
OpenEye OEToolkits 2.0.7CCN(CC1C(C(C(O1)n2cc(c3c2ncnc3N)C#Cc4cccnc4)O)O)S(=O)(=O)c5ccc(c(c5)C#N)OC
FormulaC28 H27 N7 O6 S
Name~{N}-[[(2~{R},3~{S},4~{R},5~{R})-5-[4-azanyl-5-(2-pyridin-3-ylethynyl)pyrrolo[2,3-d]pyrimidin-7-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methyl]-3-cyano-~{N}-ethyl-4-methoxy-benzenesulfonamide
ChEMBL
DrugBank
ZINC
PDB chain9feh Chain A Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB9feh Structure of SARS-CoV-2 MTase nsp14 with the inhibitor STM957 reveals inhibition mechanism that is shared with a poxviral MTase VP39.
Resolution1.99 Å
Binding residue
(original residue number in PDB)
G333 P335 D352 A353 L366 F367 Y368 C387 N388 F506
Binding residue
(residue number reindexed from 1)
G112 P114 D131 A132 L145 F146 Y147 C166 N167 F246
Annotation score1
External links
PDB RCSB:9feh, PDBe:9feh, PDBj:9feh
PDBsum9feh
PubMed39188530
UniProtP0DTD1|R1AB_SARS2 Replicase polyprotein 1ab (Gene Name=rep);
P41212|ETV6_HUMAN Transcription factor ETV6 (Gene Name=ETV6)

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