Structure of PDB 9ciw Chain A Binding Site BS01

Receptor Information
>9ciw Chain A (length=203) Species: 648998 (Penguinpox virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SATTIQKELENIVVKERQNKKDTILMGLKVEVPWNYCDWASISFYDVRLE
SGILDMESIAVKYMTGCDIPPAVTLGITNKDQEANFQRFKELTRNIDLTS
LSFTCKEVICFPQSRASKELGANGRAVVMKLEASDDVKALRNVLFNVVPT
PRDIFGPVLSDPVWCPHVTIGYVRADDEDNKNSFIELAEAFRGSKIKVIG
WCE
Ligand information
Ligand IDA1AWU
InChIInChI=1S/C20H25N10O11P/c21-14-8-15(24-3-23-14)29(4-25-8)18-12(34)10(32)7(40-18)2-38-42(36,37)41-13-11(33)6(1-31)39-19(13)30-5-26-9-16(30)27-20(22)28-17(9)35/h3-7,10-13,18-19,31-34H,1-2H2,(H,36,37)(H2,21,23,24)(H3,22,27,28,35)
InChIKeyZLNKIMYMVZHDPX-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.385NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO)[CH](O)[CH]3O[P](O)(=O)OC[CH]4O[CH]([CH](O)[CH]4O)n5cnc6c(N)ncnc56
OpenEye OEToolkits 2.0.7c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OC4C(C(OC4n5cnc6c5N=C(NC6=O)N)CO)O)O)O)N
CACTVS 3.385NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO)[C@H](O)[C@H]3O[P](O)(=O)OC[C@H]4O[C@@H]([C@H](O)[C@H]4O)n5cnc6c(N)ncnc56
ACDLabs 12.01NC1=Nc2c(ncn2C2OC(CO)C(O)C2OP(=O)(O)OCC2OC(n3cnc4c(N)ncnc43)C(O)C2O)C(=O)N1
OpenEye OEToolkits 2.0.7c1nc(c2c(n1)n(cn2)[C@@H]3[C@@H]([C@H]([C@H](O3)COP(=O)(O)O[C@@H]4[C@H]([C@H](O[C@H]4n5cnc6c5N=C(NC6=O)N)CO)O)O)O)N
FormulaC20 H25 N10 O11 P
Name[(2~{R},3~{R},4~{R},5~{S})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl [(2~{R},3~{R},4~{S},5~{R})-2-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-5-(hydroxymethyl)-4-oxidanyl-oxolan-3-yl] hydrogen phosphate
ChEMBL
DrugBank
ZINC
PDB chain9ciw Chain A Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB9ciw Animal and bacterial viruses share conserved mechanisms of immune evasion.
Resolution2.4 Å
Binding residue
(original residue number in PDB)
R17 T23 L25 Y63 T74 I77 F111 P112 F155 H167 T169 Y172
Binding residue
(residue number reindexed from 1)
R17 T23 L25 Y63 T74 I77 F111 P112 F155 H167 T169 Y172
Annotation score1
External links