Structure of PDB 9cd7 Chain A Binding Site BS01

Receptor Information
>9cd7 Chain A (length=276) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LANVSELELPADPKWELSRARLTLGKPLGEGAFGQVVMAEAIGIDKDRAA
KPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQGGP
LYVLVEYAAKGNLREFLRARRPPGLQLTFKDLVSCAYQVARGMEYLASQK
CIHRDLAARNVLVTEDNVMKIADFGLLPVKWMAPEALFDRVYTHQSDVWS
FGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTHDLYMIMRE
CWHAAPSQRPTFKQLVEDLDRVLTVT
Ligand information
Ligand IDA1AV2
InChIInChI=1S/C25H24Cl2N6O3S/c1-15(23-19(26)9-28-10-20(23)27)36-17-4-5-21-18(7-17)24(31-30-21)16-3-6-22(29-8-16)32-11-25(12-32)13-33(14-25)37(2,34)35/h3-10,15H,11-14H2,1-2H3,(H,30,31)/t15-/m1/s1
InChIKeyJOAFWIHZEBKYQK-OAHLLOKOSA-N
SMILES
SoftwareSMILES
ACDLabs 12.01CS(=O)(=O)N1CC2(CN(C2)c2ccc(cn2)c2n[NH]c3ccc(cc32)OC(C)c2c(Cl)cncc2Cl)C1
CACTVS 3.385C[C@@H](Oc1ccc2[nH]nc(c3ccc(nc3)N4CC5(C4)CN(C5)[S](C)(=O)=O)c2c1)c6c(Cl)cncc6Cl
OpenEye OEToolkits 2.0.7C[C@H](c1c(cncc1Cl)Cl)Oc2ccc3c(c2)c(n[nH]3)c4ccc(nc4)N5CC6(C5)CN(C6)S(=O)(=O)C
CACTVS 3.385C[CH](Oc1ccc2[nH]nc(c3ccc(nc3)N4CC5(C4)CN(C5)[S](C)(=O)=O)c2c1)c6c(Cl)cncc6Cl
OpenEye OEToolkits 2.0.7CC(c1c(cncc1Cl)Cl)Oc2ccc3c(c2)c(n[nH]3)c4ccc(nc4)N5CC6(C5)CN(C6)S(=O)(=O)C
FormulaC25 H24 Cl2 N6 O3 S
Name(3P)-5-[(1R)-1-(3,5-dichloropyridin-4-yl)ethoxy]-3-{6-[6-(methanesulfonyl)-2,6-diazaspiro[3.3]heptan-2-yl]pyridin-3-yl}-1H-indazole
ChEMBL
DrugBank
ZINC
PDB chain9cd7 Chain A Residue 801 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB9cd7 Discovery of TYRA-300: First Oral Selective FGFR3 Inhibitor for the Treatment of Urothelial Cancers and Achondroplasia.
Resolution2.53 Å
Binding residue
(original residue number in PDB)
L478 G479 E480 V486 A506 Y557 A558 A559 N562 L624
Binding residue
(residue number reindexed from 1)
L28 G29 E30 V36 A56 Y107 A108 A109 N112 L162
Annotation score1
External links
PDB RCSB:9cd7, PDBe:9cd7, PDBj:9cd7
PDBsum9cd7
PubMed39258897
UniProtP22607|FGFR3_HUMAN Fibroblast growth factor receptor 3 (Gene Name=FGFR3)

[Back to BioLiP]