Structure of PDB 9c9v Chain A Binding Site BS01

Receptor Information
>9c9v Chain A (length=138) Species: 10407 (Hepatitis B virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SMDIDPYKEFGATVELLSFLPSDFFPSVRDLLDTAAALYRDALESPEHCS
PHHTALRQAILCWGDLMTLATWVGTNLEDPASRDLVVSYVNTNVGLKFRQ
LLWFHISCLTFGRETVLEYLVSFGVWIRTPPAARPPNA
Ligand information
Ligand IDA1AVK
InChIInChI=1S/C22H23ClFN3O2/c1-13(2)12-27(22(29)26-15-8-9-20(24)19(23)10-15)14(3)18-11-25-21(28)17-7-5-4-6-16(17)18/h4-11,13-14H,12H2,1-3H3,(H,25,28)(H,26,29)/t14-/m1/s1
InChIKeyGKFLVTCVDVUITL-CQSZACIVSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7C[C@H](C1=CNC(=O)c2c1cccc2)N(CC(C)C)C(=O)Nc3ccc(c(c3)Cl)F
ACDLabs 12.01Fc1ccc(cc1Cl)NC(=O)N(CC(C)C)C(C)C1=CNC(=O)c2ccccc12
OpenEye OEToolkits 2.0.7CC(C)CN(C(C)C1=CNC(=O)c2c1cccc2)C(=O)Nc3ccc(c(c3)Cl)F
CACTVS 3.385CC(C)CN([C@H](C)C1=CNC(=O)c2ccccc12)C(=O)Nc3ccc(F)c(Cl)c3
CACTVS 3.385CC(C)CN([CH](C)C1=CNC(=O)c2ccccc12)C(=O)Nc3ccc(F)c(Cl)c3
FormulaC22 H23 Cl F N3 O2
NameN'-(3-chloro-4-fluorophenyl)-N-(2-methylpropyl)-N-[(1R)-1-(1-oxo-1,2-dihydroisoquinolin-4-yl)ethyl]urea
ChEMBL
DrugBank
ZINC
PDB chain9c9v Chain A Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB9c9v Rational Design, Synthesis, and Structure-Activity Relationship of a Novel Isoquinolinone-Based Series of HBV Capsid Assembly Modulators Leading to the Identification of Clinical Candidate AB-836.
Resolution2.63 Å
Binding residue
(original residue number in PDB)
P25 T33 W102 S106 F110 Y118
Binding residue
(residue number reindexed from 1)
P26 T34 W103 S107 F111 Y119
Annotation score1
External links