Structure of PDB 8ytq Chain A Binding Site BS01

Receptor Information
>8ytq Chain A (length=126) Species: 713585 (Thioalkalivibrio paradoxus ARh 1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AHLRAADPPEAIVDAAGLREIRLVFSEPVVDRFSTFRAFRLSLPENGIRN
LTQLNTLASELGVDTEESAHHEVELESDLSSQSAEVTLHSDEPLPAGAYA
VVWRVLSVDGHTTTGFHAFVHAGGTA
Ligand information
Ligand IDCU
InChIInChI=1S/Cu/q+2
InChIKeyJPVYNHNXODAKFH-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Cu+2]
CACTVS 3.341[Cu++]
FormulaCu
NameCOPPER (II) ION
ChEMBL
DrugBankDB14552
ZINC
PDB chain8ytq Chain A Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8ytq The structure of apoCopC from Thioalkalivibrio paradoxus
Resolution1.7 Å
Binding residue
(original residue number in PDB)		D140 H142
Binding residue
(residue number reindexed from 1)		D109 H111
Annotation score3
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005507 copper ion binding
GO:0046872 metal ion binding
Biological Process
GO:0046688 response to copper ion
Cellular Component
GO:0042597 periplasmic space

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8ytq, PDBe:8ytq, PDBj:8ytq
PDBsum8ytq
PubMed
UniProtW0DSL1

[Back to BioLiP]