Structure of PDB 8wvg Chain A Binding Site BS01

Receptor Information
>8wvg Chain A (length=394) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ALVRWLQESRRSRKLILFIVFLALLLDNMLLTVVVPIIPSYLLNENVQVG
LLFASKATVQLITNPFIGLLTNRIGYPIPIFAGFCIMFVSTIMFAFSSSY
AFLLIARSLQGIGSSCSSVAGMGMLASVYTDDEERGNVMGIALGGLAMGV
LVGPPFGSVLYEFVGKTAPFLVLAALVLLDGAIQLFVLQPSRVQPESQKG
TPLTTLLKDPYILIAAGSICFANMGIAMLEPALPIWMMETMCSRKWQLGV
AFLPASISYLIGTNIFGILAHKMGRWLCALLGMIIVGVSILCIPFAKNIY
GLIAPNFGVGFAIGMVDSSMMPIMGYLVDLRHVSVYGSVYAIADVAFCMG
YAIGPSAGGAIAKAIGFPWLMTIIGIIDILFAPLCFFLRSPPAK
Ligand information
Ligand IDXEQ
InChIInChI=1S/C19H27NO3/c1-12(2)7-14-11-20-6-5-13-8-18(22-3)19(23-4)9-15(13)16(20)10-17(14)21/h8-9,12,14,16H,5-7,10-11H2,1-4H3/t14-,16+/m0/s1
InChIKeyMKJIEFSOBYUXJB-GOEBONIOSA-N
SMILES
SoftwareSMILES
CACTVS 3.385COc1cc2CCN3C[C@H](CC(C)C)C(=O)C[C@@H]3c2cc1OC
CACTVS 3.385COc1cc2CCN3C[CH](CC(C)C)C(=O)C[CH]3c2cc1OC
OpenEye OEToolkits 2.0.7CC(C)CC1CN2CCc3cc(c(cc3C2CC1=O)OC)OC
OpenEye OEToolkits 2.0.7CC(C)C[C@H]1CN2CCc3cc(c(cc3[C@H]2CC1=O)OC)OC
FormulaC19 H27 N O3
Name(3~{S},11~{b}~{R})-9,10-dimethoxy-3-(2-methylpropyl)-1,3,4,6,7,11~{b}-hexahydrobenzo[a]quinolizin-2-one
ChEMBL
DrugBank
ZINC
PDB chain8wvg Chain A Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8wvg Neurotransmitter recognition by human vesicular monoamine transporter 2.
Resolution3.18 Å
Binding residue
(original residue number in PDB)
L37 T38 F135 R189 E312 Y341 Y433
Binding residue
(residue number reindexed from 1)
L31 T32 F53 R107 E230 Y259 Y351
Annotation score1
External links
PDB RCSB:8wvg, PDBe:8wvg, PDBj:8wvg
PDBsum8wvg
PubMed
UniProtQ05940|VMAT2_HUMAN Synaptic vesicular amine transporter (Gene Name=SLC18A2)

[Back to BioLiP]