Structure of PDB 8wlb Chain A Binding Site BS01

Receptor Information
>8wlb Chain A (length=288) Species: 550 (Enterobacter cloacae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AAEYAVVLKTLSNPFWVDMKKGIEDEAKTLGVSVDIFASPSEGDFQSQLQ
LFEDLSNKKYKGIAFAPLSSVNLVMPVARAWQKGLYLVNLDEKIDMDNLK
KAGGNVEGFVTTDNVAVGAKGADFIINKLGAEGGEVAIIEGKAGNASGEA
RRNGATEAFKKANQIKLVASQPADWDRIKALDVATNVLQRNPNLKAFYCA
NDTMAMGVAQAVANAGKIGKVLVVGTDGIPEARKMVEAGQMTATVAQNPA
DIGATGLKLMVDAAKTGKVIPLEKTPEFKLVDSILVTK
Ligand information
Ligand IDWEB
InChIInChI=1S/C6H12O6/c7-2-6(11)5(10)4(9)3(8)1-12-6/h3-5,7-11H,1-2H2/t3-,4-,5-,6+/m1/s1
InChIKeyLKDRXBCSQODPBY-KAZBKCHUSA-N
SMILES
SoftwareSMILES
CACTVS 3.385OC[C]1(O)OC[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 2.0.7C1[C@H]([C@H]([C@H]([C@@](O1)(CO)O)O)O)O
OpenEye OEToolkits 2.0.7C1C(C(C(C(O1)(CO)O)O)O)O
CACTVS 3.385OC[C@]1(O)OC[C@@H](O)[C@@H](O)[C@H]1O
FormulaC6 H12 O6
Namealpha-D-psicopyranose;
(2~{S},3~{R},4~{R},5~{R})-2-(hydroxymethyl)oxane-2,3,4,5-tetrol
ChEMBL
DrugBank
ZINCZINC000004097154
PDB chain8wlb Chain A Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8wlb X-ray structures of Enterobacter cloacae allose-binding protein in complexes with monosaccharides demonstrate its unique recognition mechanism for high affinity to allose.
Resolution1.71 Å
Binding residue
(original residue number in PDB)
K32 N36 F38 W39 D114 E115 S170 R174 N224 D250 Q270
Binding residue
(residue number reindexed from 1)
K9 N13 F15 W16 D91 E92 S147 R151 N201 D227 Q247
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0030246 carbohydrate binding
Cellular Component
GO:0030288 outer membrane-bounded periplasmic space

View graph for
Molecular Function

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Cellular Component
External links
PDB RCSB:8wlb, PDBe:8wlb, PDBj:8wlb
PDBsum8wlb
PubMed37820454
UniProtA0A9W3L9M6

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